Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_002671.1 Length=15179 Score E Sequences producing significant alignments: (Bits) Value seq95 87.8 2e-13 >seq95 Length=1800565 Score = 87.8 bits (96), Expect = 2e-13 Identities = 110/148 (74%), Gaps = 5/148 (3%) Strand=Plus/Plus Query 14511 ATAAATATTATGGCAAATGGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTT 14570 ||| ||| ||| || ||| | |||||||||||||||| | |||||| | |||||| Sbjct 820335 ATACATAAGATGCAAACTGGCATTGTAAAATGGTTTAACGAAACTAAAGGCTACGGCTTT 820394 Query 14571 ATCACTTCAGAAGAAG---GCAAAGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGAT 14627 || ||| ||||||| | |||||||||| || ||||| | |||| ||| ||| | | Sbjct 820395 ATTACTCCAGAAGATGGCAGCAAAGATTTATTTGCTCATTATTCAGAAATTCAAAGCGCT 820454 Query 14628 GGATTCAAATCACTTGA-TGAAGGTCAA 14654 || |||||| | ||| | |||||| ||| Sbjct 820455 GGTTTCAAAAC-CTTAACTGAAGGACAA 820481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48440510182832