Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq179 84.2 2e-11
>seq179
Length=2312354
Score = 84.2 bits (92), Expect = 2e-11
Identities = 207/312 (66%), Gaps = 8/312 (3%)
Strand=Plus/Plus
Query 20356 AGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCA 20415
|||||| | ||| | | || ||||| | | |||||| | ||||||||||||||||
Sbjct 182471 AGAAGATTGATTGTTAGTGCATGGAATGTTGCTGATGTGGATAAAATGGCTTTGCCTCCA 182530
Query 20416 TGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAA 20475
|| || | | | || ||||| || | | |||| || || ||| | ||||||
Sbjct 182531 TGCCACACAATTTTTCAGTTTTATGTATCCGACGGAAAATTATCATGCCAACTTTATCAA 182590
Query 20476 CGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACG 20535
||| || ||| | ||||| || ||||| ||||||||| ||||| || |||||
Sbjct 182591 CGAAGTGCCGATCTTTTTCTGGGAGTCCCTTTTAATATTGCATCATATGCACTCCTTACA 182650
Query 20536 TATATGATTGCACATGTTA-CAGATTTAAAAACGGGT---GACTTAGTCCACACCATAGG 20591
||| | ||||| || | | ||| | | || | || || | ||||| | ||
Sbjct 182651 ATGATGGTGGCACAGGTAACCGGATATCA----GGCTTACGAATTTATACACACATTCGG 182706
Query 20592 AGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAATTACAGTTAACACGACAACC 20651
||| | |||||| || || |||||| | |||| || || | ||||| | || |||
Sbjct 182707 AGATGTGCATATATATCTAAATCATTTTGAACAGGTAGAACTTCAGTTGAGCAGAGCACC 182766
Query 20652 AAAACAATTCCC 20663
|||| |||| ||
Sbjct 182767 AAAAAAATTACC 182778
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399063385556440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |