Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq179 84.2 2e-11 >seq179 Length=2312354 Score = 84.2 bits (92), Expect = 2e-11 Identities = 207/312 (66%), Gaps = 8/312 (3%) Strand=Plus/Plus Query 20356 AGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCA 20415 |||||| | ||| | | || ||||| | | |||||| | |||||||||||||||| Sbjct 182471 AGAAGATTGATTGTTAGTGCATGGAATGTTGCTGATGTGGATAAAATGGCTTTGCCTCCA 182530 Query 20416 TGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAA 20475 || || | | | || ||||| || | | |||| || || ||| | |||||| Sbjct 182531 TGCCACACAATTTTTCAGTTTTATGTATCCGACGGAAAATTATCATGCCAACTTTATCAA 182590 Query 20476 CGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACG 20535 ||| || ||| | ||||| || ||||| ||||||||| ||||| || ||||| Sbjct 182591 CGAAGTGCCGATCTTTTTCTGGGAGTCCCTTTTAATATTGCATCATATGCACTCCTTACA 182650 Query 20536 TATATGATTGCACATGTTA-CAGATTTAAAAACGGGT---GACTTAGTCCACACCATAGG 20591 ||| | ||||| || | | ||| | | || | || || | ||||| | || Sbjct 182651 ATGATGGTGGCACAGGTAACCGGATATCA----GGCTTACGAATTTATACACACATTCGG 182706 Query 20592 AGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAATTACAGTTAACACGACAACC 20651 ||| | |||||| || || |||||| | |||| || || | ||||| | || ||| Sbjct 182707 AGATGTGCATATATATCTAAATCATTTTGAACAGGTAGAACTTCAGTTGAGCAGAGCACC 182766 Query 20652 AAAACAATTCCC 20663 |||| |||| || Sbjct 182767 AAAAAAATTACC 182778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399063385556440