Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_003038.1
Length=212482
Score E
Sequences producing significant alignments: (Bits) Value
seq39 118 1e-21
>seq39
Length=3240425
Score = 118 bits (130), Expect = 1e-21
Identities = 135/179 (75%), Gaps = 2/179 (1%)
Strand=Plus/Plus
Query 145147 CTTTATAATATTCCATTAACttttttgat-ttttCTAACTTCGTCCAGTCTCTAAATCTT 145205
|||||||||| | || || || |||| | |||||||| | |||||| |||||||| |
Sbjct 2060274 CTTTATAATACTTGAT-AAGTTGTTTGCTGTTTTCTAATCGCATCCAGTTTCTAAATCGT 2060332
Query 145206 TTTCCTCCACTATTGCATAATTTAGTTGCGTTAAAACATTCTGTGTTCTTGTCGACTACG 145265
|| || ||||||| ||||||||||| || ||||||||| | || ||| || | ||
Sbjct 2060333 TTACCGCCACTATGACATAATTTAGTAGCATTAAAACATCCAGTCGACTTATCTATAACC 2060392
Query 145266 AGCTTAAAATCTCCAAATAACCCATAATAAAAGTTAtttttgattttttCATAACAAAC 145324
| |||||||||||||| | ||||| || | | | |||||||| ||||||||| ||
Sbjct 2060393 AAATTAAAATCTCCAAAGAGACCATACCAATACTGGTCTTTGATTTGTTCATAACATAC 2060451
Score = 102 bits (112), Expect = 1e-16
Identities = 110/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 145962 TTTTCAAGCCGAGTCCACTGTCTAAATTGTTTACCTCCACTATTGCATAATTTAGTTGCG 146021
||||| | || |||| | ||||||| ||||||| ||||||| ||||||||||| ||
Sbjct 2060303 TTTTCTAATCGCATCCAGTTTCTAAATCGTTTACCGCCACTATGACATAATTTAGTAGCA 2060362
Query 146022 TTAAAACATTCTGTGTTCTTGTCGACTACGAGCTTAAAATCTCTAAATAACCCATAATAA 146081
||||||||| | || ||| || | || | |||||||||| ||| | ||||| ||
Sbjct 2060363 TTAAAACATCCAGTCGACTTATCTATAACCAAATTAAAATCTCCAAAGAGACCATACCAA 2060422
Query 146082 AAGTTATCTTTGATTTTTTCATAACA 146107
| | |||||||||| |||||||||
Sbjct 2060423 TACTGGTCTTTGATTTGTTCATAACA 2060448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 679603725517440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |