Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_003315.1 Length=31508 Score E Sequences producing significant alignments: (Bits) Value seq95 114 3e-21 >seq95 Length=1800565 Score = 114 bits (126), Expect = 3e-21 Identities = 74/81 (91%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 |||||||||||| ||||||||||||| ||||||| ||||||||||| |||||||||| Sbjct 410792 TGGTGGGTCGTGCAGGATTCGAACCTGCGACCAATTGATTAAAAGTCAACTGCTCTACCA 410733 Query 418 ACTGAGCTAACGACCCAATTA 438 ||||||||||||||||||||| Sbjct 410732 ACTGAGCTAACGACCCAATTA 410712 Score = 107 bits (118), Expect = 4e-19 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 |||||||||||| ||||||||||||| ||||||| ||||||||||| |||||||||| Sbjct 410900 TGGTGGGTCGTGCAGGATTCGAACCTGCGACCAATTGATTAAAAGTCAACTGCTCTACCA 410841 Query 418 ACTGAGCTAACGACCCA 434 ||||||||||||||||| Sbjct 410840 ACTGAGCTAACGACCCA 410824 Score = 89.7 bits (98), Expect = 1e-13 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 356 ATTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTAC 415 ||||||||||||| ||| |||||||| |||||| |||||| |||| ||||||||| Sbjct 411010 ATTGGTGGGTCGTATAGGGCTCGAACCTATGACCAATTGATTAAGAGTCAACTGCTCTAC 410951 Query 416 CGACTGAGCTAACGACCCA 434 | ||||||||||||||||| Sbjct 410950 CAACTGAGCTAACGACCCA 410932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100674352238880