Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq714 141 9e-29
>seq714
Length=734366
Score = 141 bits (156), Expect = 9e-29
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 11890 ATCTCTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGC 11949
|||||| | |||||||||||| | || ||| |||||||||||||||| ||||||||| ||
Sbjct 47749 ATCTCTAATATATGTATCTATAAGTAGACTGTACATTTCTGAATGAACATTTTCCATTGC 47808
Query 11950 TATTTGAAATCCATAGAAACATCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTC 12009
|||||||| ||||||||||||| ||| |||| ||||| || ||||||||
Sbjct 47809 AATTTGAAAGCCATAGAAACATCTTGCTTCTGTGACTTGTACTTCTTGGCTGAATCTTTC 47868
Query 12010 CGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTAT 12069
| | || ||||||||||| ||||| | |||||| ||||| |||| ||| |||
Sbjct 47869 TACAAGGTTTTCATTTACAATTCCATCTGATGCTGCAAAGAATGCAAGTACGTGTGATAT 47928
Query 12070 AAAGTATTTTTCGTCTTTAGTTAATTTATCCCA 12102
|| | |||| || || || | ||| |||||
Sbjct 47929 GAAATGCCTTTCATCATTTGTAAGTTTTTCCCA 47961
Score = 122 bits (134), Expect = 8e-23
Identities = 145/196 (74%), Gaps = 3/196 (2%)
Strand=Plus/Plus
Query 11681 AATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCA 11740
|| || ||||| ||||| | ||||| ||| || | ||| || || | |||||| ||
Sbjct 43931 AAAGTCAATCCTGGCATAAGTCCTCTTTTCTTCAGCCAGAAAATTGAAGCAAAGCTCCCG 43990
Query 11741 GAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA---CCTTG 11797
|| ||||| || |||||||| || ||||||||||| ||||| || |||||| | |
Sbjct 43991 GAGAAGAAAATACCCTCCACTGCAGCAAATGCTACCACTCTCTCGCCATATGTTGCAGTA 44050
Query 11798 TTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCT 11857
| | | ||||| | ||||||||| |||||||||||||| || |||||||||
Sbjct 44051 TCATTTGCAATCCACTGAAGGGCCCAATCTGCTTTCTTTTTTACACACGGCATTGTTTCA 44110
Query 11858 ATAGCGTTAAATAAAT 11873
||||| ||||||||||
Sbjct 44111 ATAGCATTAAATAAAT 44126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468379604164480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |