Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq714 84.2 2e-11 >seq714 Length=734366 Score = 84.2 bits (92), Expect = 2e-11 Identities = 113/155 (73%), Gaps = 3/155 (2%) Strand=Plus/Minus Query 22447 TTCATGTCTCACATACTGGCATTCTTTGCAATGGCAGATGGCATTGTAGGCGACAACCTT 22506 ||||| || ||| |||| |||||||||||| ||||||| |||||| || |||||| Sbjct 47931 TTCATATCACACGTACTTGCATTCTTTGCAGCATCAGATGGAATTGTAAATGAAAACCTT 47872 Query 22507 GTGTGCAATTTCGCAAAAGAACTTGACTATATTCCAGAAGCCAGAGCTTTCTATGGGTTT 22566 || | ||| ||||| | || | | ||||||| ||| ||||||||| ||| Sbjct 47871 GTAGAAAGATTCAGCCAAGAAGT--ACAAG-TCACAGAAGCAAGATGTTTCTATGGCTTT 47815 Query 22567 CAGGTGGCAATGGAAAATATACATGCTGAAATGTA 22601 || | |||||||||||| | ||| | |||||||| Sbjct 47814 CAAATTGCAATGGAAAATGTTCATTCAGAAATGTA 47780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356125963127176