Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq783 102 8e-17
seq1551 95.1 1e-14
seq2315 93.3 4e-14
>seq783
Length=580412
Score = 102 bits (112), Expect = 8e-17
Identities = 153/212 (72%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTC 139614
|| ||||| | || || || || |||||||| || || || || | || | |||||
Sbjct 391333 ACCAAGTGGAGAGTGGATTCCTTCTGAATGTTGTAGTCAGACAGGGTTCGTCCA-TCTTC 391275
Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674
|| |||||||||||| |||| ||||| |||||||| ||||| ||||| || || || |
Sbjct 391274 AAGTTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGAATGCCCTCCTTATC-CT 391216
Query 139675 GATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCT 139733
|| |||| | ||| | | ||| | |||||| | | ||| || || | || | || |
Sbjct 391215 GAATTTTGGCTTTCACATTTTCGATTGTGTCTGAAGCCTCAACTTCCAAAGTGATGGTTT 391156
Query 139734 TGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|||| ||||| || || ||||| || ||||||
Sbjct 391155 TGCCAGTCAAAGTCTTGACGAAAATCTGCATA 391124
>seq1551
Length=444118
Score = 95.1 bits (104), Expect = 1e-14
Identities = 111/150 (74%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675
|| |||||||||||| |||| ||||| |||||||| ||||||||||| | || || |
Sbjct 25191 AGTTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGTATGCCCGCCTTATCCTGG 25250
Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735
||||| ||||| | ||| | |||||| | | ||| || || | || | || |||
Sbjct 25251 ATTTTGGCTTTTACATTTTCGATTGTGTCTGAAGCCTCAACTTCCAAAGTGATGGTTTTG 25310
Query 139736 CCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| ||||| || || ||||| || ||||||
Sbjct 25311 CCAGTCAAAGTCTTGACGAAAATCTGCATA 25340
>seq2315
Length=138946
Score = 93.3 bits (102), Expect = 4e-14
Identities = 139/192 (72%), Gaps = 4/192 (2%)
Strand=Plus/Minus
Query 139575 CTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAG 139633
|||||||||||||||| || | ||||| || | ||||| |||||||| || || |
Sbjct 26967 CTTTTTGAATGTTATAGTCTGAAAGTGTGCGTCCA-TCTTCCAGCTGTTTCCCTGCGAAA 26909
Query 139634 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTG 139692
|||| | |||||||| ||||| || || |||||||| ||| |||||| ||||| |
Sbjct 26908 ATCAATCTCTGCTGATCAGGAGGAATCCCCTCTTTGTC-TTGAATTTTTGCTTTTACATT 26850
Query 139693 TTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTAC 139752
|| | || || | || |||||||||| ||| | || || || || | ||||| ||
Sbjct 26849 CTCAATGGTATCAGATGGTTCCACCTCAAGGGTTATGGTTTTACCAGTAAGAGTTTTCAC 26790
Query 139753 GAATATTTGCAT 139764
|| || |||||
Sbjct 26789 AAAAATCTGCAT 26778
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| ||||| | ||| | ||| || || | ||||||||||| ||||| || |||||
Sbjct 33219 CCACCTCGCAGACGGAGAACCAAATGCAGAGTAGACTCTTTCTGAATATTGTAATCTGAA 33160
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| ||||| || ||||||||||| |||||| | || || | ||||| || |||||
Sbjct 33159 AGTGTGCGACCATCCTCGAGCTGTTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGAGGG 33100
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| || || || || ||| | |||| ||||| | || | || || | || |||||
Sbjct 33099 ATTCCCTCCTTATC-TTGAATCTTTGCTTTTACATTCTCAATGGTATCTGAAGGTTCCAC 33041
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | || | ||||| || ||||| || || || || || |||||
Sbjct 33040 TTCCAATGTAATTGTCTTTCCTGTCAAGGTCTTCACAAAGATCTGCAT 32993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495910269766400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |