Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq714 111 2e-19 >seq714 Length=734366 Score = 111 bits (122), Expect = 2e-19 Identities = 162/227 (71%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 13682 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 13739 ||||||| || ||| | |||||| ||||| || ||||||||||| | ||||| ||| Sbjct 43902 CCTCATCCCTTGAAATCAATTCGTTGCTGAAA--GTCAATCCTGGCATAAGTCCTCTTTT 43959 Query 13740 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 13799 || | ||| || |||| ||| || ||||| ||||| || ||||| ||||||||||| Sbjct 43960 CTTCAGCCAGAAAATTGAAGCAAAGCTCCCGGAGAAGAAAATACCCTCCACTGCAGCAAA 44019 Query 13800 CGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTC 13859 |||| | || || ||| | | ||| | | |||| ||||| | ||||| || Sbjct 44020 TGCTACCACTCTCTCGCCATATGTTGCAGTATCATTTGCAATCCACTGAAGGGCCCAATC 44079 Query 13860 AGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAAT 13906 | ||| ||||| | | | ||||||||| || ||||| ||||||| Sbjct 44080 TGCTTTCTTTTTTACACACGGCATTGTTTCAATAGCATTAAATAAAT 44126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478440485330880