Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq211 109 8e-19
seq495 102 1e-16
>seq211
Length=1809889
Score = 109 bits (120), Expect = 8e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 96906 GCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAAC 96965
|| ||||| |||||||| ||||| || ||||| ||||| || | || || ||||||
Sbjct 909719 GCTGTCTATTTGGAACCATGGCATGCTGACGTGTTTGAATTCCTTGACTTGAAGAAAAAC 909778
Query 96966 TCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTG 97025
||||| ||||| ||||||| ||| |||| ||||| |||||| | || ||| |
Sbjct 909779 ACTGGCAAAGAAGAAATTAGAGCCAGAGACATGTTCTATGCGCTCTGGATTCCTGATCTT 909838
Query 97026 TTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCC 97085
|||||| | || || || | || |||||||| ||||| || || | | ||
Sbjct 909839 TTCATGGAACGTGTTAAGCTCAATGAAATGTGGAGCCTGATGTGTCCACACGCTTGTCCT 909898
Query 97086 GGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAG 97118
||||| || || ||||||||||| || ||||||
Sbjct 909899 GGTCTTTCAGACTGCTGGGGCGAGGAATTTGAG 909931
>seq495
Length=1347633
Score = 102 bits (112), Expect = 1e-16
Identities = 229/340 (67%), Gaps = 7/340 (2%)
Strand=Plus/Minus
Query 70067 GGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC 70126
|| ||||| || |||||||| ||||| || ||| |||||| || | ||||| |||
Sbjct 721997 GGTGATCTAGGTCCAGTGTATGGATTTCAATGGCGGCACTTTGGAGCTAAGTACAAAGAT 721938
Query 70127 TGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCTC 70186
||||||| ||||| || ||||| ||||||||||| | | ||||| | | ||
Sbjct 721937 ATAAAGACAGATTATTCTGGACAGGGCATTGATCAATTGTTGCGCGTGATTGAAATTATC 721878
Query 70187 AAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCAC 70246
|||| ||| || ||| | | || | ||| | | |||||||| | ||| | |
Sbjct 721877 AAGAACAAGCCTGATGATCGTCGTATTATCATGAGTGCTTGGAATCCAGTTGATATACCT 721818
Query 70247 CAAATGGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGATGGCAAA--- 70303
||||||| || ||||| ||||||||| | | |||||| || ||| | ||||||
Sbjct 721817 AAAATGGCTCTCCCACCATGTCACTGTCTCGTTCAGTTCTA--TGTA-GCAGGCAAAGAG 721761
Query 70304 TTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATT 70363
| || ||| | || || | ||| || ||||| | |||||||| || || ||
Sbjct 721760 CTTTCTTGCCAGTTATACCAACGTTCTGCTGATATGGGATTAGGTGTACCATTCAATGTT 721701
Query 70364 GCAAGCTATTCTATGTTGACGCACATGATTGCTCACATTA 70403
||||| ||| | |||| || ||| |||| || ||||
Sbjct 721700 GCAAGTTATGCATTGTTAACATGTATGGTTGC-CAAATTA 721662
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740829545753920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |