Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq211 109 8e-19 seq495 102 1e-16 >seq211 Length=1809889 Score = 109 bits (120), Expect = 8e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 96906 GCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAAC 96965 || ||||| |||||||| ||||| || ||||| ||||| || | || || |||||| Sbjct 909719 GCTGTCTATTTGGAACCATGGCATGCTGACGTGTTTGAATTCCTTGACTTGAAGAAAAAC 909778 Query 96966 TCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTG 97025 ||||| ||||| ||||||| ||| |||| ||||| |||||| | || ||| | Sbjct 909779 ACTGGCAAAGAAGAAATTAGAGCCAGAGACATGTTCTATGCGCTCTGGATTCCTGATCTT 909838 Query 97026 TTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCC 97085 |||||| | || || || | || |||||||| ||||| || || | | || Sbjct 909839 TTCATGGAACGTGTTAAGCTCAATGAAATGTGGAGCCTGATGTGTCCACACGCTTGTCCT 909898 Query 97086 GGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAG 97118 ||||| || || ||||||||||| || |||||| Sbjct 909899 GGTCTTTCAGACTGCTGGGGCGAGGAATTTGAG 909931 >seq495 Length=1347633 Score = 102 bits (112), Expect = 1e-16 Identities = 229/340 (67%), Gaps = 7/340 (2%) Strand=Plus/Minus Query 70067 GGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC 70126 || ||||| || |||||||| ||||| || ||| |||||| || | ||||| ||| Sbjct 721997 GGTGATCTAGGTCCAGTGTATGGATTTCAATGGCGGCACTTTGGAGCTAAGTACAAAGAT 721938 Query 70127 TGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCTC 70186 ||||||| ||||| || ||||| ||||||||||| | | ||||| | | || Sbjct 721937 ATAAAGACAGATTATTCTGGACAGGGCATTGATCAATTGTTGCGCGTGATTGAAATTATC 721878 Query 70187 AAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCAC 70246 |||| ||| || ||| | | || | ||| | | |||||||| | ||| | | Sbjct 721877 AAGAACAAGCCTGATGATCGTCGTATTATCATGAGTGCTTGGAATCCAGTTGATATACCT 721818 Query 70247 CAAATGGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGATGGCAAA--- 70303 ||||||| || ||||| ||||||||| | | |||||| || ||| | |||||| Sbjct 721817 AAAATGGCTCTCCCACCATGTCACTGTCTCGTTCAGTTCTA--TGTA-GCAGGCAAAGAG 721761 Query 70304 TTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATT 70363 | || ||| | || || | ||| || ||||| | |||||||| || || || Sbjct 721760 CTTTCTTGCCAGTTATACCAACGTTCTGCTGATATGGGATTAGGTGTACCATTCAATGTT 721701 Query 70364 GCAAGCTATTCTATGTTGACGCACATGATTGCTCACATTA 70403 ||||| ||| | |||| || ||| |||| || |||| Sbjct 721700 GCAAGTTATGCATTGTTAACATGTATGGTTGC-CAAATTA 721662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740829545753920