Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_004616.1 Length=44970 Score E Sequences producing significant alignments: (Bits) Value seq14302 93.3 1e-14 >seq14302 Length=8876 Score = 93.3 bits (102), Expect = 1e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 16784 TTACAGGTAAAGAAGCTTATGAGGCCTTACAAGGCGTTTGGCTAATGGAAATGGCAGAAC 16843 |||| ||||||||||| | || | ||||||| |||||| || || | | ||||| Sbjct 8697 TTACGGGTAAAGAAGCCTTAGAAAGCATACAAGGGTCTTGGCTTATTGAGTTAGGAGAAC 8638 Query 16844 TTGCAGCTACAAGAAAAGCTGAAGTTGAAGCTATTAAGCATTTCATATCTAAACAAGTTG 16903 |||| | | | ||||||||||| || || ||||||| ||| || |||| ||| | Sbjct 8637 TTGCCGGGTTACGTAAAGCTGAAGTAGACGCAGTTAAGCACTTCGTAAGTAAAAAAGAAG 8578 Query 16904 ACCGATTTCGTGTTGCTTATGGGCATTATATTGAAGATTTTCCAAGGCAATGTATTTTCA 16963 |||| ||| | || ||||| || | | | ||| | || || ||| || | ||| Sbjct 8577 ACCGTTTTAGAGTGGCTTACGGCAAACGTGTAGAACACTTCCCCCGGCGTTGCGTCTTCT 8518 Query 16964 TTGGTACAACTAATAAAGTTGATTTCTTAAGAGA 16997 | || ||||||||| | | ||||| |||||||| Sbjct 8517 TCGGAACAACTAATGAGGAAGATTTTTTAAGAGA 8484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143740069742528