Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_004687.1 Length=156102 Score E Sequences producing significant alignments: (Bits) Value seq2787 84.2 2e-11 seq1885 84.2 2e-11 seq7088 82.4 8e-11 seq2342 82.4 8e-11 seq1659 82.4 8e-11 >seq2787 Length=1710943 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 99153 ATGCGAAGGTAGCTCAGCTGGCAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGATCGT 99212 ||||||| ||||||||| ||| ||||| | ||||||||||||| | ||||||||| ||| Sbjct 516232 ATGCGAAAGTAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGGGTTCGA 516173 Query 99213 AACCCGTTCTTCGCTC 99228 | ||||| ||||||| Sbjct 516172 ATCCCGTCTTTCGCTC 516157 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 99154 TGCGAAGGTAGCTCAGCTGGCAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGATCGTA 99213 |||||| ||||||||| ||| ||||| | ||||||||||||| | ||||||||| ||| | Sbjct 253217 TGCGAAAGTAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGGGTTCGAA 253158 Query 99214 ACCCGTTCTTCGCTC 99228 ||||| ||||||| Sbjct 253157 TCCCGTCTTTCGCTC 253143 >seq1885 Length=148911 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 99153 ATGCGAAGGTAGCTCAGCTGGCAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGATCGT 99212 ||||||| ||||||||| ||| ||||| | ||||||||||||| | ||||||||| ||| Sbjct 88486 ATGCGAAAGTAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGGGTTCGA 88545 Query 99213 AACCCGTTCTTCGCTC 99228 | ||||| ||||||| Sbjct 88546 ATCCCGTCTTTCGCTC 88561 >seq7088 Length=425276 Score = 82.4 bits (90), Expect = 8e-11 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 95656 GTAGCGGTGTAGAGCAGCTAGGTAGCTCGCCGGGCTCATAACCCGGAGGACGCGTGTTCG 95715 || |||| ||||||||||| ||||||||| ||||||||||||||||||| ||| ||||| Sbjct 185437 GTCGCGGGGTAGAGCAGCT-GGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCG 185495 Query 95716 AATCACGCCACCGCCAC 95732 |||| | | |||| || Sbjct 185496 AATCCTGTCCCCGCAAC 185512 >seq2342 Length=1184292 Score = 82.4 bits (90), Expect = 8e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 116616 GGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCG 116675 || |||||||||||||| |||| || ||| ||| ||||| |||| || |||| Sbjct 773164 GGACCGGGCCGTGGCTCGGCCGCAGGTTCGGCGGTTGCCTACTGTTTGGGTATTACCTTA 773105 Query 116676 ATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTTATCAACCCGGACCG 116728 || |||||||| ||||||||| || |||| ||||| ||| | ||||| || || Sbjct 773104 ATTGACCCGATTAAGTACGACTTGCTGTTTGAGCGTTTTTTGAACCCAGATCG 773052 >seq1659 Length=254437 Score = 82.4 bits (90), Expect = 8e-11 Identities = 114/155 (74%), Gaps = 5/155 (3%) Strand=Plus/Minus Query 116607 TGCCTGTGCGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGC 116666 || ||||| || ||||| || || || |||| || ||| | || | |||| | | || Sbjct 98743 TGGCTGTG-GGACCGGGACGCGGTTCGGCCGCCGGGTCGGTCGTGGCATACGCCCTCGGG 98685 Query 116667 ATCACCTCGATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTTATCAACCCGGAC 116726 || || |||||||||||||| ||||||||| | |||||||| || |||| || ||| Sbjct 98684 ATAACTAATATCGACCCGATCAAATACGACCTGCTTTTCGAGCGTTTCCTCAATCCCGAC 98625 Query 116727 CG--CCCCGACTTCCCCGACATCGACGTCGACTTC 116759 || | || ||| ||||| |||||| |||| ||| Sbjct 98624 CGTATCTCG-CTT-CCCGATATCGACATCGATTTC 98592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499243636435840