Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq2315 95.1 1e-14 seq242 86.0 5e-12 >seq2315 Length=138946 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || ||||||| | | |||| |||| |||||||| || |||||||||||||| | Sbjct 33219 CCACCTCGCAGACGGAGAACCAAATGCAGAGTAGACTCTTTCTGAATATTGTAATCTGAA 33160 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| | ||||| |||||||| || ||| |||| ||||||||||| || || Sbjct 33159 AGTGTGCGACCATCCTCGAGCTGTTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGAGGG 33100 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | ||||| || || ||| || |||||| | | | ||||| ||| ||| | Sbjct 33099 ATTCCCTCCTTATCTTGAATCTTTGCTTTTACATTCTCAATGGTATCTGAAGGTTCCACT 33040 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || | ||||| || || ||||| || || || ||||| || ||||| Sbjct 33039 TCCAATGTAATTGTCTTTCCTGTCAAGGTCTTCACAAAGATCTGCAT 32993 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/192 (70%), Gaps = 8/192 (4%) Strand=Plus/Minus Query 18854 TTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCC----TCCAGCTGTTTACCCGCATA 18909 |||||||| || || || | | ||| |||||| ||||||||||| || || | Sbjct 26965 TTTTGAATGTTATAGTCTGAAAGTGT----GCGTCCATCTTCCAGCTGTTTCCCTGCGAA 26910 Query 18910 AATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTG 18969 ||| | |||||||||||| || | ||||||||||| |||||| |||||| | Sbjct 26909 AATCAATCTCTGCTGATCAGGAGGAATCCCCTCTTTGTCTTGAATTTTTGCTTTTACATT 26850 Query 18970 GCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGAC 19029 | | ||||| || ||| || | ||| ||||||||||| || | |||||| || Sbjct 26849 CTCAATGGTATCAGATGGTTCCACCTCAAGGGTTATGGTTTTACCAGTAAGAGTTTTCAC 26790 Query 19030 AAAAATTTGCAT 19041 |||||| ||||| Sbjct 26789 AAAAATCTGCAT 26778 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 18854 TTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATA 18913 ||||| || |||||||| | || ||| | | ||||||||||| ||||| ||| | ||| Sbjct 27318 TTTTGTATGTTGTAATCAGACAGTGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATA 27259 Query 18914 AGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCG 18973 ||||| |||||||| || | || || ||||| || || |||||| | | Sbjct 27258 AGTCTTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGTATCTTTGCTTTTACATTTTCA 27199 Query 18974 ACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAA 19033 | ||||| || ||| ||| | ||| || ||||| || || ||||| || || || Sbjct 27198 ATTGTATCAGATGGTTCCACTTCCAAGGTGATAGTTTTTCCAGTCAAAGTCTTAACGAAG 27139 Query 19034 ATTTGCATT 19042 ||||||||| Sbjct 27138 ATTTGCATT 27130 >seq242 Length=1788442 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/193 (71%), Gaps = 3/193 (2%) Strand=Plus/Minus Query 18852 CCTTT-TGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAA 18910 ||||| |||||||| ||||| | | |||| | ||||| ||||| || || ||| || Sbjct 1569967 CCTTTCTGAATATTATAATCAGAGAGTGTTCGTCCATCCTCTAGCTGCTTTCCAGCAAAA 1569908 Query 18911 ATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGG 18970 || | |||||| ||||| || | ||| || ||||| ||||| ||| || | Sbjct 1569907 ATCAATCTCTGTTGATCAGGAGGGATGCCTTCCTTGTCTTGGATTTTGGCTTTCACATTT 1569848 Query 18971 CCGACAGTATCGCCAGGCTCCGTT-TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGAC 19029 | | |||||| ||||| | |||| |||||| |||||||| ||||||||||| || Sbjct 1569847 TCAATAGTATCAG-AGGCTTCAACCTCGAGGGTAATTGTTTTACCCGTTAAAGTTTTCAC 1569789 Query 19030 AAAAATTTGCATT 19042 || || |||||| Sbjct 1569788 GAATATCTGCATT 1569776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414447535792048