Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq783 87.8 2e-12 >seq783 Length=580412 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 19994 CTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAA 20053 |||| ||| | ||| |||||||||||||| || ||||||||||| | |||| Sbjct 390343 CTCAGCACAAGATGGAGTGTAGATTCTTTCTGAATGTTGTAATCTGAAAGAGTTCGGCCG 390284 Query 20054 TCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTG 20113 || || | || ||||| ||| | || | |||||||| || ||| | |||||| ||| Sbjct 390283 TCCTCGAGCTGCTTGCCAGCAAAGATCAATCTCTGTTGGTCTGGGGGAATGCCTTCCTTG 390224 Query 20114 TCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATG 20173 || |||||| ||| || | | | | ||| || || ||||| ||||| Sbjct 390223 TCCTGAATTTTGGCTTTGACATTCTCGATCGTATCCGAAGCCTCGACTTCCAAAGTAATA 390164 Query 20174 GTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||| ||||| | ||||| |||||||| |||||| Sbjct 390163 GTTTTCCCGGTAAGAGTTTTTACAAAAATCTGCATT 390128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419460420678552