Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_005356.1 Length=41708 Score E Sequences producing significant alignments: (Bits) Value seq6928 174 4e-39 >seq6928 Length=39225 Score = 174 bits (192), Expect = 4e-39 Identities = 285/408 (70%), Gaps = 2/408 (0%) Strand=Plus/Minus Query 9279 GCCGTACAGTTAATTACCCGTGCAATGGGCGATGCAGGTATCGAAGCAAGTGAATATCAA 9338 || |||||| | |||||||||| ||||| ||||| | || | || | ||||||| Sbjct 11159 GCGGTACAGCTTGTTACCCGTGCTATGGGGGATGCTGAGATTAATGCCAATGAATATGGT 11100 Query 9339 AGTGTTTTGGATATGGTAGCAAAAGCGGCGCAAGCTAGTGGGATAAGTGTTGATACATTA 9398 | ||| ||||||||| | | |||||||||| || ||| | ||||| ||||| Sbjct 11099 ACTGTCTTGGATATGCTGACCGTAGCGGCGCAAAAGAGCGGGGTTTCAATTGATTCATTA 11040 Query 9399 GCTGATAGTATTACTAAATACGGCGCTCCAATGAGAGCTATGGGCTTTGAGATGAAAGAA 9458 | | | | | | ||||| ||||| || ||| | || | || |||| | | || Sbjct 11039 ACCGGAAATCTGGCGAAATATGGCGCGCCTATGCGTGCGCTTGGGCTTGATACGCAAACT 10980 Query 9459 TCAATTGCTTTATTCTCTCAATGGGAAAAGTCAGGCGTTAATACTGAAATAGCATTCAGT 9518 |||||||| | || | ||||||||| | || ||||||||||| || |||||||| Sbjct 10979 TCAATTGCGATGTTTGCCGGATGGGAAAAAGCGGGTGTTAATACTGAGATTGCATTCAGC 10920 Query 9519 GGTTTGAAAAAAGCTATATCAAATTGGGGTAAAGCTGGTAAAAACCCAAGAGAAGAATTT 9578 || ||||||| || || || || ||||| ||||| ||| || | || | |||||| Sbjct 10919 GGGATGAAAAAGGCAATTTCCAACTGGGGAGCCGCTGGAAAAGACGCGAGTGTAGAATTC 10860 Query 9579 AAGAAGACATTAGCAG-AAATTGAAAAGACGCCGGATATAGCTAGCGCAACAAGTTTAGC 9637 || ||| | |||| | || | | |||||||||| || | || || ||| | || Sbjct 10859 GGAAAAACAAT-GCAGCAGATCAAGGATGCGCCGGATATTGCAACAGCGACCAGTATGGC 10801 Query 9638 GATTGAAGCATTTGGTGCAAAGGCAGGTCCTGATTTAGCAGACGCTAT 9685 ||||||||||||||| || || || || || |||||||| |||||||| Sbjct 10800 GATTGAAGCATTTGGAGCGAAAGCCGGCCCCGATTTAGCGGACGCTAT 10753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133304742859680