Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq2315 96.9 3e-15
seq783 87.8 2e-12
>seq2315
Length=138946
Score = 96.9 bits (106), Expect = 3e-15
Identities = 141/194 (73%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 48539 TTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAAT 48597
||||||||||| || || | || ||| || | || |||||||| || || || ||||
Sbjct 26965 TTTTGAATGTTATAGTCTGA-AAGTGTGCGTCCATCTTCCAGCTGTTTCCCTGCGAAAAT 26907
Query 48598 TAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTG-ATAGACG 48656
|| | ||||||||| || | | || ||||| |||||| ||||| | | |
Sbjct 26906 CAATCTCTGCTGATCAGGAGGAATCCCCTCTTTGTCTTGAATTTT-TGCTTTTACATTCT 26848
Query 48657 CTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAA 48716
| |||||||| | | ||| ||| | |||||||||||||| || |||||||||||||
Sbjct 26847 CAATGGTATCAGATGGTTCCACCTCAAGGGTTATGGTTTTACCAGTAAGAGTTTTCACAA 26788
Query 48717 AAATCTGCATCGTG 48730
||||||||||| ||
Sbjct 26787 AAATCTGCATCCTG 26774
>seq783
Length=580412
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || || | || | ||| | ||| ||||| || || |||||||||||||| |
Sbjct 390356 ACCACCACGAAGTCTCAGCACAAGATGGAGTGTAGATTCTTTCTGAATGTTGTAATCTGA 390297
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
| ||| ||||||| |||||||| || | | || || | ||| || || ||
Sbjct 390296 AAGAGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAATCTCTGTTGGTCTGGGGG 390237
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | |||||||||| |||||| |||| | | | || ||||| | || |||
Sbjct 390236 AATGCCTTCCTTGTCCTGAATTTTGGCTTTGACATTCTCGATCGTATCCGAAGCCTCGAC 390177
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| | || || ||||| ||||| |||||||| ||||||||||||||
Sbjct 390176 TTCCAAAGTAATAGTTTTCCCGGTAAGAGTTTTTACAAAAATCTGCAT 390129
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421123917896792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |