Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq495 136 5e-27 seq86 122 1e-22 >seq495 Length=1347633 Score = 136 bits (150), Expect = 5e-27 Identities = 228/324 (70%), Gaps = 8/324 (2%) Strand=Plus/Plus Query 6911 ATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATC 6970 ||||||| ||||||||| || ||||| || |||||||||||||||||||| || || | Sbjct 721679 ATGTTAACAATGCATAACTTGCAACATTGAATGGTACACCTAATCCCATATCAGCAGAAC 721738 Query 6971 TTTGATAACATTGACAAGATAAAATATTGTCTATAGCATAAAATTGACACAATACA-TGA 7029 ||| || | || ||||| | ||| || |||| || ||| || | ||| ||| Sbjct 721739 GTTGGTATAACTGGCAAGAAAGCTCTTTGCCTGCTACATAGAACTGA-ACGAGACAGTGA 721797 Query 7030 CATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAAATACGT 7089 ||||| || | | | | | ||||||| ||||||||||||| |||| | |||||| Sbjct 721798 CATGGTGGGAGAGCCATTTTAGGTATATCAACTGGATTCCAAGCACTCATGATAATACGA 721857 Query 7090 CTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTG---TAATTGATCTATACCC 7146 | ||||| || ||||| || | | || ||| | | |||||||| || ||| Sbjct 721858 CGATCATCAGG-CTTGTTCTTGA--TAATTTCAATCACGCGCAACAATTGATCAATGCCC 721914 Query 7147 TGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAAC 7206 || || ||||| || | || | | || ||||||||||| || | ||||||||| Sbjct 721915 TGTCCAGAATAATCTGTCTTTATATCTTTGTACTTAGCTCCAAAGTGCCGCCATTGAAAT 721974 Query 7207 CCATAAATAGGACCTAAATCACCT 7230 ||||| | ||||||| ||||||| Sbjct 721975 CCATACACTGGACCTAGATCACCT 721998 >seq86 Length=2766441 Score = 122 bits (134), Expect = 1e-22 Identities = 151/203 (74%), Gaps = 8/203 (4%) Strand=Plus/Minus Query 164501 TAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACAT 164560 ||||||| ||||| | |||||||| |||||| |||||||||||| || |||||| Sbjct 2135692 TAGGCTGCAAACACGTCAAAGGAATCTTATTATTTGGACCTCCTGGAACAGGGAAAACAC 2135633 Query 164561 TAATGGCTCGATGCATTGCT-CAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTAAT 164616 | |||||||| |||| ||| | |||||| || || || |||||||| ||| Sbjct 2135632 TTATGGCTCGTCAAATTGGAACAA--TGTTAAATGCTCGGGAACCC--AAAATTGTCAAT 2135577 Query 164617 GGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTT 164676 || ||| || | ||| | |||||||||||||| |||||||| ||| |||| |||||| Sbjct 2135576 GGACCTCAAATTTTGGATAAATATGTAGGTGAATCAGAAGCCAATATTAGGCGTTTGTTT 2135517 Query 164677 CAGGAGGCTGAAGAAGAACAAAA 164699 ||| || |||||||| |||| Sbjct 2135516 GCGGAAGCAGAAGAAGAGGAAAA 2135494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595687339267200