Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq244 114 7e-21 seq14 105 3e-18 seq196 104 1e-17 seq331 102 4e-17 seq2934 100 1e-16 seq143 100 1e-16 seq11 87.8 9e-13 seq427 84.2 1e-11 seq1033 82.4 4e-11 >seq244 Length=1909656 Score = 114 bits (126), Expect = 7e-21 Identities = 85/98 (87%), Gaps = 4/98 (4%) Strand=Plus/Plus Query 11433 ATAGAAT-TAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGT 11491 ||| ||| ||| |||||| || ||||||||| |||||||||| |||||||||||| Sbjct 884953 ATATAATCTAAAAAAAAAACA---TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGT 885009 Query 11492 TATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||| |||||||||||||||||||| Sbjct 885010 TATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 885047 Score = 114 bits (126), Expect = 7e-21 Identities = 81/91 (89%), Gaps = 3/91 (3%) Strand=Plus/Plus Query 11440 TAATAAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 |||| ||||| |||| ||||||||| |||||||||| ||||||||||||||||||| Sbjct 928796 TAATTAAAAA--AAATATGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGC 928853 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||| |||||||||||||||||||| Sbjct 928854 ACGACGCTCTAACCAACTGAGCTAATGGGCC 928884 Score = 113 bits (124), Expect = 2e-20 Identities = 85/99 (86%), Gaps = 4/99 (4%) Strand=Plus/Plus Query 11431 ATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCG 11490 |||| |||| |||||||| | ||||||||| |||||||||| ||||||||||| Sbjct 931488 ATATGTAATT--TAAAAAATATA--TGGCCCATGGGGGGATCGAACCCACGACCTTCGCG 931543 Query 11491 TTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||| |||||||||||||||||||| Sbjct 931544 TTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 931582 Score = 107 bits (118), Expect = 1e-18 Identities = 70/78 (90%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 || |||| ||||| |||||||||| ||||||||||||||||||||||||||||| || Sbjct 910154 AACTTGGACCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAAC 910213 Query 11512 CAACTGAGCTAATGGGCC 11529 |||||||||||||||||| Sbjct 910214 CAACTGAGCTAATGGGCC 910231 Score = 105 bits (116), Expect = 3e-18 Identities = 71/80 (89%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 || ||||||| || |||||||||| ||||||||||||||||||||||||||||| || Sbjct 923552 AACTTGGCCCGTGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAAC 923611 Query 11512 CAACTGAGCTAATGGGCCGT 11531 |||||||||||| ||||||| Sbjct 923612 CAACTGAGCTAACGGGCCGT 923631 Score = 102 bits (112), Expect = 4e-17 Identities = 73/84 (87%), Gaps = 3/84 (4%) Strand=Plus/Minus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 ||||||| |||||| || |||||||||| |||||||||||||||||||||||||| Sbjct 919722 AAAATCA---TGGCCCGTGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGC 919666 Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529 ||| |||||||||||||| ||||| Sbjct 919665 TCTAACCAACTGAGCTAACGGGCC 919642 Score = 102 bits (112), Expect = 4e-17 Identities = 73/84 (87%), Gaps = 3/84 (4%) Strand=Plus/Minus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 ||||||| |||||| || |||||||||| |||||||||||||||||||||||||| Sbjct 925786 AAAATCA---TGGCCCGTGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGC 925730 Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529 ||| |||||||||||||| ||||| Sbjct 925729 TCTAACCAACTGAGCTAACGGGCC 925706 Score = 100 bits (110), Expect = 1e-16 Identities = 70/79 (89%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 11452 AAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRA 11510 |||| |||||| || |||||||||| ||||||||||||||||||||||||||||| | Sbjct 911262 AAATATGGCCCGTGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAA 911321 Query 11511 CCAACTGAGCTAATGGGCC 11529 ||||||||||||| ||||| Sbjct 911322 CCAACTGAGCTAACGGGCC 911340 >seq14 Length=4009625 Score = 105 bits (116), Expect = 3e-18 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 ||||||||| || |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct 3807491 AATTGGCCCGTGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACC 3807550 Query 11513 AACTGAGCTAATGGGCC 11529 ||||||||||| ||||| Sbjct 3807551 AACTGAGCTAACGGGCC 3807567 Score = 98.7 bits (108), Expect = 5e-16 Identities = 75/88 (85%), Gaps = 1/88 (1%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 || ||||||| || |||||||||| ||||||||||||||||||||||||||||| || Sbjct 3807643 AAGTTGGCCCGTGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAAC 3807702 Query 11512 CAACTGAGCTAATGGGCC-GTCGACGAT 11538 |||||||||||| |||| || || ||| Sbjct 3807703 CAACTGAGCTAACAGGCCAGTTGAAGAT 3807730 >seq196 Length=1519024 Score = 104 bits (114), Expect = 1e-17 Identities = 76/89 (85%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||||||| || ||||||| || |||||||||| ||||||| ||||||||||||| Sbjct 1076133 AATAAAAAAAAAATTTGGCCCGTGGGGGGATCGAACCCACGACCTTGGCGTTATTAGCAC 1076074 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||| |||||||||||||| ||||| Sbjct 1076073 CACGCTCTAACCAACTGAGCTAACGGGCC 1076045 Score = 102 bits (112), Expect = 4e-17 Identities = 76/89 (85%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||||||| || ||||||| || |||||||||| ||||||| ||||||||||||| Sbjct 1304085 AATAAAAAA--AATTTGGCCCGTGGGGGGATCGAACCCACGACCTTGGCGTTATTAGCAC 1304028 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||| |||||||||||||| ||||| Sbjct 1304027 CACGCTCTAACCAACTGAGCTAACGGGCC 1303999 Score = 96.9 bits (106), Expect = 2e-15 Identities = 72/85 (85%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| || ||||||| || |||||||||| ||||||| ||||||||||||| ||| Sbjct 499423 AAAAAAAAAGTTGGCCCGTGGGGGGATCGAACCCACGACCTTGGCGTTATTAGCACCACG 499364 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||| ||||| Sbjct 499363 CTCTAACCAACTGAGCTAACGGGCC 499339 >seq331 Length=1161828 Score = 102 bits (112), Expect = 4e-17 Identities = 77/90 (86%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||||||| || ||||||| || |||||||||| ||||||| ||||||||||||| Sbjct 184592 AATAAAAAAA-AAGTTGGCCCGTGGGGGGATCGAACCCACGACCTTGGCGTTATTAGCAC 184534 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||| |||||||||||||| |||||| Sbjct 184533 CACGCTCTAACCAACTGAGCTAACGGGCCG 184504 >seq2934 Length=37431 Score = 100 bits (110), Expect = 1e-16 Identities = 75/89 (84%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||||| || ||||||| || |||||||||| ||||||| ||||||||||||| Sbjct 1618 AAAAAAAAAAAAAGTTGGCCCGTGGGGGGATCGAACCCACGACCTTGGCGTTATTAGCAC 1677 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||| |||||||||||||| ||||| Sbjct 1678 CACGCTCTAACCAACTGAGCTAACGGGCC 1706 >seq143 Length=2364679 Score = 100 bits (110), Expect = 1e-16 Identities = 77/90 (86%), Gaps = 3/90 (3%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||||| ||||| |||| ||| |||||||||| ||||||| ||||||||||||| Sbjct 1983036 AATAAAAA--CAAAT-GGCCTGTGAGGGGATCGAACCCACGACCTTGGCGTTATTAGCAC 1982980 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||| |||||||||||||| |||||| Sbjct 1982979 CACGCTCTAACCAACTGAGCTAACGGGCCG 1982950 Score = 96.9 bits (106), Expect = 2e-15 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||| ||| |||||||||| ||||||| ||||||||||||| ||||||| |||||| Sbjct 2001318 TGGCCCGTGAGGGGATCGAACCCACGACCTTGGCGTTATTAGCACCACGCTCTAACCAAC 2001259 Query 11516 TGAGCTAATGGGCCG 11530 |||||||| |||||| Sbjct 2001258 TGAGCTAACGGGCCG 2001244 Score = 95.1 bits (104), Expect = 6e-15 Identities = 76/90 (84%), Gaps = 3/90 (3%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||||| || || ||||| || | |||||||| ||||||||||||||||||||| Sbjct 1989337 AATAAAAA--CAGAT-GGCCCGTGGGGGAATCGAACCCACGACCTTCGCGTTATTAGCAC 1989281 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||| |||||||||||||| |||||| Sbjct 1989280 CACGCTCTAACCAACTGAGCTAACGGGCCG 1989251 Score = 95.1 bits (104), Expect = 6e-15 Identities = 76/90 (84%), Gaps = 3/90 (3%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||||| || || ||||| || |||||||||| ||||||| ||||||||||||| Sbjct 1992861 AATAAAAA--CATAT-GGCCCGTGGTGGGATCGAACCCACGACCTTGGCGTTATTAGCAC 1992805 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||| |||||||||||||| |||||| Sbjct 1992804 CACGCTCTAACCAACTGAGCTAACGGGCCG 1992775 Score = 95.1 bits (104), Expect = 6e-15 Identities = 76/90 (84%), Gaps = 3/90 (3%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||||| || || ||||| || |||||||||| ||||||| ||||||||||||| Sbjct 1995776 AATAAAAA--CAGAT-GGCCCGTGGGTGGATCGAACCCACGACCTTGGCGTTATTAGCAC 1995720 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||| |||||||||||||| |||||| Sbjct 1995719 CACGCTCTAACCAACTGAGCTAACGGGCCG 1995690 Score = 93.3 bits (102), Expect = 2e-14 Identities = 58/63 (92%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||||||||||| |||||||||||||| ||| Sbjct 1991700 GGATCGAACCCACGACCTTGGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACGGG 1991641 Query 11528 CCG 11530 ||| Sbjct 1991640 CCG 1991638 Score = 93.3 bits (102), Expect = 2e-14 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||| || |||||||||| ||||||| ||||||||||||| ||||||| |||||| Sbjct 1995608 TGGCCCGTGGGGGGATCGAACCCACGACCTTGGCGTTATTAGCACCACGCTCTAACCAAC 1995549 Query 11516 TGAGCTAATGGGCCG 11530 |||||||| |||||| Sbjct 1995548 TGAGCTAACGGGCCG 1995534 Score = 91.5 bits (100), Expect = 8e-14 Identities = 75/90 (83%), Gaps = 3/90 (3%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||||| || || ||||| || |||||||||| ||||||| ||||||||||||| Sbjct 1990789 AATAAAAA--CAGAT-GGCCCGTGGGGGGATCGAACCCACGACCTTGGCGTTATTAGCAC 1990733 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||| |||||||||||||| ||||| Sbjct 1990732 CACGCTCTAACCAACTGAGCTAACAGGCCG 1990703 Score = 91.5 bits (100), Expect = 8e-14 Identities = 75/90 (83%), Gaps = 3/90 (3%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||||| || || || || || |||||||||| ||||||| ||||||||||||| Sbjct 1992238 AATAAAAA--CAGAT-GGTCCGTGGGGGGATCGAACCCACGACCTTGGCGTTATTAGCAC 1992182 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||| |||||||||||||| |||||| Sbjct 1992181 CACGCTCTAACCAACTGAGCTAACGGGCCG 1992152 Score = 91.5 bits (100), Expect = 8e-14 Identities = 75/90 (83%), Gaps = 3/90 (3%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||||| || || |||| || |||||||||| ||||||| ||||||||||||| Sbjct 1992550 AATAAAAA--CAGAT-GGCCTGTGGGGGGATCGAACCCACGACCTTGGCGTTATTAGCAC 1992494 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||| |||||||||||||| |||||| Sbjct 1992493 CACGCTCTAACCAACTGAGCTAACGGGCCG 1992464 Score = 91.5 bits (100), Expect = 8e-14 Identities = 75/90 (83%), Gaps = 3/90 (3%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||||| || || ||||| || |||||||||| ||||||| ||||||||| ||| Sbjct 2002049 AATAAAAA--CATAT-GGCCCGTGGGGGGATCGAACCCACGACCTTGGCGTTATTAACAC 2001993 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||| |||||||||||||| |||||| Sbjct 2001992 CACGCTCTAACCAACTGAGCTAACGGGCCG 2001963 Score = 91.5 bits (100), Expect = 8e-14 Identities = 75/90 (83%), Gaps = 3/90 (3%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||||| || || ||||| || |||||||||| ||||||| ||||||||||||| Sbjct 2003882 AATAAAAA--CAGAT-GGCCCGTGGGGGGATCGAACCCACGACCTTGGCGTTATTAGCAC 2003826 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||| |||||||||||||| | |||| Sbjct 2003825 CACGCTCTAACCAACTGAGCTAAAGTGCCG 2003796 Score = 89.7 bits (98), Expect = 3e-13 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||| | ||||||||||||||||||||| ||||||| |||||||||||||| ||| Sbjct 1993642 GGATCGAAACCACGACCTTCGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACGGG 1993583 Query 11528 CCG 11530 ||| Sbjct 1993582 CCG 1993580 Score = 89.7 bits (98), Expect = 3e-13 Identities = 81/100 (81%), Gaps = 2/100 (2%) Strand=Plus/Minus Query 11439 TTAATAA-AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497 |||| || |||| || || ||| ||| |||||||||| ||||||| |||||||||| Sbjct 1993827 TTAACAACAAAAACAGAT-GGCTTGTGAGGGGATCGAACCCACGACCTTGGCGTTATTAG 1993769 Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCCGTCGACGA 11537 ||| || |||| |||||||||||||| ||||||| | ||| Sbjct 1993768 CACCACACTCTAACCAACTGAGCTAACGGGCCGTTGTCGA 1993729 Score = 87.8 bits (96), Expect = 9e-13 Identities = 72/86 (84%), Gaps = 3/86 (3%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||||| || || ||||| || |||||||||| ||||||| ||||||||||||| Sbjct 1990164 AATAAAAA--CATAT-GGCCCGTGGGGGGATCGAACCCACGACCTTGGCGTTATTAGCAC 1990108 Query 11501 GACGCTCTRACCAACTGAGCTAATGG 11526 ||||||| |||||||||||||| || Sbjct 1990107 CACGCTCTAACCAACTGAGCTAACGG 1990082 Score = 87.8 bits (96), Expect = 9e-13 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||| || |||||||||| ||| ||| ||||||||||||| ||||||| |||||| Sbjct 2002881 TGGCCCGTGGTGGGATCGAACCCACGATCTTGGCGTTATTAGCACCACGCTCTAACCAAC 2002822 Query 11516 TGAGCTAATGGGCCG 11530 |||||||| |||||| Sbjct 2002821 TGAGCTAACGGGCCG 2002807 Score = 86.0 bits (94), Expect = 3e-12 Identities = 74/90 (82%), Gaps = 3/90 (3%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||||| || || || || || | |||||||||| |||||| ||||||||||||| Sbjct 1982570 AATAAAAA--CAGAT-GGACCTTGGAGGGATCGAACCCATGACCTTGGCGTTATTAGCAC 1982514 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||| | |||||||||||| |||||| Sbjct 1982513 CACGCTCTAAACAACTGAGCTAACGGGCCG 1982484 Score = 86.0 bits (94), Expect = 3e-12 Identities = 74/90 (82%), Gaps = 3/90 (3%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||||| || || ||||| || ||| |||||| ||||||| ||||||||||||| Sbjct 1982726 AATAAAAA--CAGAT-GGCCCGTGGGGGGAACGAACCCACGACCTTGGCGTTATTAGCAC 1982670 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||| |||||||||| ||| |||||| Sbjct 1982669 CACGCTCTAACCAACTGAGGTAACGGGCCG 1982640 Score = 86.0 bits (94), Expect = 3e-12 Identities = 76/93 (82%), Gaps = 2/93 (2%) Strand=Plus/Minus Query 11439 TTAATAA-AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497 |||| || |||| || || ||||| || |||||||||| ||||||| |||||||||| Sbjct 1990325 TTAACAATAAAAGCATAT-GGCCCGTGGGGGGATCGAACCCACGACCTTGGCGTTATTAG 1990267 Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 || ||||||| |||||||||||| | |||||| Sbjct 1990266 CAACACGCTCTAACCAACTGAGCTTACGGGCCG 1990234 Score = 86.0 bits (94), Expect = 3e-12 Identities = 74/90 (82%), Gaps = 3/90 (3%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||||| || || ||||| | |||||||||| ||||||| ||||||||||||| Sbjct 2001737 AATAAAAA--CATAT-GGCCCGTTGGGGGATCGAACCCACGACCTTGGCGTTATTAGCAC 2001681 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||| |||||||||||||| ||||| Sbjct 2001680 CACGCTCTAACCAACTGAGCTAAAAGGCCG 2001651 Score = 86.0 bits (94), Expect = 3e-12 Identities = 74/90 (82%), Gaps = 3/90 (3%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||||| || |||| ||| || | |||||||| ||||||| ||||||||||||| Sbjct 2004627 AATAAAAA--CAGATTG-CCCGTGGGGGAATCGAACCCACGACCTTGGCGTTATTAGCAC 2004571 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||| |||||||||| ||| |||||| Sbjct 2004570 CACGCTCTAACCAACTGAGGTAACGGGCCG 2004541 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||| |||||||| ||||||| |||||||||||||| | | Sbjct 1991388 GGATCGAACCCACGACCTTCGCGTAATTAGCACCACGCTCTAACCAACTGAGCTAACGTG 1991329 Query 11528 CCG 11530 ||| Sbjct 1991328 CCG 1991326 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| || |||| |||||||||||||| ||| Sbjct 1991544 GGATCGAACCCACGACCTTGGCGTTATTAGCACCACCCTCTAACCAACTGAGCTAACGGG 1991485 Query 11528 CCG 11530 ||| Sbjct 1991484 CCG 1991482 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||| || |||| ||||| ||| ||| ||||||||||||| ||||||| |||||| Sbjct 1992382 TGGCCCGTGGGGGGATTGAACCCACGAACTTGGCGTTATTAGCACCACGCTCTAACCAAC 1992323 Query 11516 TGAGCTAATGGGCCG 11530 |||||||| |||||| Sbjct 1992322 TGAGCTAACGGGCCG 1992308 Score = 84.2 bits (92), Expect = 1e-11 Identities = 73/90 (81%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||||| || || |||| ||| | ||||||| ||||||| ||||| ||||||| Sbjct 1993980 AAAAAAAAAACAGAT-GGCCTGTGAGTGCATCGAACTCACGACCTTGGCGTTCTTAGCAC 1993922 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||| |||||||||||||| |||||| Sbjct 1993921 CACGCTCTAACCAACTGAGCTAACGGGCCG 1993892 Score = 84.2 bits (92), Expect = 1e-11 Identities = 70/85 (82%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 |||| || || ||||| || |||||||||| ||||||| ||||||||||||| |||| Sbjct 2003723 AAAAACAGAT-GGCCCGTGGGGGGATCGAACCCACGACCTTGGCGTTATTAGCACAACGC 2003665 Query 11506 TCTRACCAACTGAGCTAATGGGCCG 11530 ||| ||| |||||||||| | |||| Sbjct 2003664 TCTAACCCACTGAGCTAAAGTGCCG 2003640 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||| ||| ||| Sbjct 2004448 GGATCGAACCCACGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGGTAACGGG 2004389 Query 11528 CCG 11530 ||| Sbjct 2004388 CCG 2004386 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| | | Sbjct 2008281 GGATCGAACCCACGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAAAGTG 2008222 Query 11528 CCG 11530 ||| Sbjct 2008221 CCG 2008219 Score = 82.4 bits (90), Expect = 4e-11 Identities = 73/90 (81%), Gaps = 3/90 (3%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||||| || || |||| || ||||||||||| ||||||| || ||| |||||| Sbjct 1991256 AATAAAAA--CATATGGGCCG-TGTGAGGATCGAACCCACGACCTTGGCTTTAATAGCAC 1991200 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530 || |||| |||||||||||||| |||||| Sbjct 1991199 CACCCTCTAACCAACTGAGCTAACGGGCCG 1991170 Score = 82.4 bits (90), Expect = 4e-11 Identities = 72/88 (82%), Gaps = 3/88 (3%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||||| || || ||||| || | | |||||| ||||||| ||||||||||||| Sbjct 2001893 AATAAAAA--CAGAT-GGCCCGTGTGGGTAACGAACCCACGACCTTGGCGTTATTAGCAC 2001837 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGC 11528 ||||||| |||||||||||||| |||| Sbjct 2001836 CACGCTCTAACCAACTGAGCTAACGGGC 2001809 Score = 82.4 bits (90), Expect = 4e-11 Identities = 75/93 (81%), Gaps = 3/93 (3%) Strand=Plus/Minus Query 11438 ATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497 || |||||||| || || ||||| || ||||||||| ||||||| |||||||||| Sbjct 2004786 ATCAATAAAAA--CAGAT-GGCCCGTGGGGAGATCGAACCCACGACCTTGGCGTTATTAG 2004730 Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||| |||||| |||||||||| ||| |||||| Sbjct 2004729 CACCACGCTCAAACCAACTGAGGTAAGGGGCCG 2004697 >seq11 Length=3755640 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||| Sbjct 1880487 GGATCGAACCCACGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACGGG 1880546 Query 11528 CC 11529 || Sbjct 1880547 CC 1880548 >seq427 Length=1636619 Score = 84.2 bits (92), Expect = 1e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 11447 AAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCT 11506 |||| ||| || ||| || | | ||||| ||||||| ||||||||||||| ||||| Sbjct 407567 AAATAAAAGTGACCCGTGTGGGAACTGAACCCACGACCTTGGCGTTATTAGCACCACGCT 407508 Query 11507 CTRACCAACTGAGCTAATGGGCCGT 11531 || ||||||||||||||| |||||| Sbjct 407507 CTAACCAACTGAGCTAATAGGCCGT 407483 >seq1033 Length=516136 Score = 82.4 bits (90), Expect = 4e-11 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| ||| ||||| ||||| ||| | | ||||||||||||| ||||||| || Sbjct 287276 AAAATGGCCTGTGAGAGGATTGAACCCACGATCATGGCGTTATTAGCACCACGCTCTAAC 287335 Query 11512 CAACTGAGCTAATGGGCCG 11530 |||||||||||| ||||| Sbjct 287336 CAACTGAGCTAAGAGGCCG 287354 Lambda K H 0.638 0.409 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261412189780192