Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_006552.1
Length=65195
Score E
Sequences producing significant alignments: (Bits) Value
seq95 111 7e-20
>seq95
Length=1800565
Score = 111 bits (122), Expect = 7e-20
Identities = 234/344 (68%), Gaps = 4/344 (1%)
Strand=Plus/Minus
Query 9388 TTCCACGAAGTCGCTGAAGGCTTTCAGCAGGGGTGCGCGTCTCGCCCGGCGA-TCGACCC 9446
|||||| | || || |||||||| | |||| |||| || |||| |||| ||||| |
Sbjct 1293972 TTCCACATAATCACTAAAGGCTTTTAATAGGG-TGCGGGTTTCGCTAGGCGCGTCGACAC 1293914
Query 9447 CTTCCTGGCAGCCGATGAAGTCGCGGAAGTAGTCGGAGAGCTTTC-TCCCGCCCTTGCCC 9505
|||| ||||| ||||| || || ||||||||||| || | ||||| | || || ||
Sbjct 1293913 CTTCTTGGCAACCGATAAAATCACGGAAGTAGTCAGA-AACTTTCTTGCCATTTTTACCA 1293855
Query 9506 TTGATGAACGAGATGTACTGCTTCGACTGCTTGTTGTTGCGCCACTCGGAGAGGTTGATT 9565
|| |||||||| || ||||| || ||||| || || ||||| || || ||||| ||
Sbjct 1293854 CGAATAAACGAGATATATTGCTTAGATTGCTTATTATTACGCCATTCTGAAAGGTTAATC 1293795
Query 9566 CGCGCCGCCAGGTGTAACTGGCCGAGGTCGAGGTGGCTCGACGGGGTGACGTCCAGTGAC 9625
|| || || | || | |||| | || ||||| | | || || || |
Sbjct 1293794 CGTGCTGCTAAATGGAGCTGGGATAAATCAAGGTGTTTAGCTTCAGTAACTTCTAAACTA 1293735
Query 9626 TCGTTCACCGCCGCCCCTTCGCTGTGGTGCAGCAGGGCGATCGCCAGGTAGTCGGTCATG 9685
|| | || || |||| | | ||||| || | || ||| | | ||| ||||||||
Sbjct 1293734 TCAGTAACAGCAATACCTTTGGTATGGTGGAGTAAGGTGATAGTTAAGTAATCGGTCATT 1293675
Query 9686 CCCTGCTGGTAGTGGGCGAACAGTACGTAGCCGCCGGTGGAGAG 9729
|| || |||||||| |||| || || || || || | |||||
Sbjct 1293674 CCTTGTTGGTAGTGAGCGATAAGCACATAACCACCCATTGAGAG 1293631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 208436201445472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |