Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq1094 208 1e-48 seq126 183 5e-41 seq95 178 2e-39 seq1599 165 1e-35 seq2330 163 5e-35 seq2441 147 4e-30 seq875 132 8e-26 seq788 111 3e-19 seq1464 89.7 8e-13 >seq1094 Length=2708314 Score = 208 bits (230), Expect = 1e-48 Identities = 373/542 (69%), Gaps = 2/542 (0%) Strand=Plus/Plus Query 193639 AACCTGCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGC 193698 |||| | ||| ||||||||||| | ||| ||||| ||||||||||| ||||||| | | Sbjct 1060810 AACCAGATGAAATCTATAATCTGGCTGCACAAAGCCATGTTAAAGTAAGCTTTGAGGTAC 1060869 Query 193699 CAGAGTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTA 193758 | || ||||| | | || || | ||||| ||| |||| || ||||| ||||||| Sbjct 1060870 CGGAATATACAGCCGAAACCGACGCCATTGGAACACTTCGAATTCTGGAAGCTGTTCGTA 1060929 Query 193759 TGTTGGGAATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTG 193818 | || || |||||||| | || || || ||||||||||| || ||||| || ||| Sbjct 1060930 TCTTAGGGTTGGAGAAAAAGGTACGTATTTATCAGGCATCGACTTCAGAACTTTACGGTA 1060989 Query 193819 GTGTTCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTG 193878 || | || | ||| | ||| ||||| || ||| | || ||||| || ||||||| Sbjct 1060990 AGGTACAAGAAATTCCCCAGAAAGAGACCACTCCTTTTTACCCTCGCTCGCCCTATGGTG 1061049 Query 193879 TAGCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACG 193938 | || || ||||| | ||||| | ||||||||||| ||| |||||| | | | Sbjct 1061050 TGGCTAAACAATATGGCTTCTGGATAACTAAGAATTATCGCGAGAGTTATGGAATGTATG 1061109 Query 193939 CTAGT-TCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACT 193997 | ||| |||||| | || ||||| || | | | | || || |||||||| || Sbjct 1061110 C-AGTGAACGGTATTTTGTTTAATCATGAGAGTGAACGTCGTGGAGAAACATTTGTTACC 1061168 Query 193998 CGTAAGATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTT 194057 || ||||| || || | | || | | || |||| | | || ||| | Sbjct 1061169 CGCAAGATCACTTTAGCAGCAGCCCGCATTCGTTTAGGCGAACAGGACAAACTCTATTTA 1061228 Query 194058 GGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGG 194117 ||||| || |||| | | | ||||||||| | ||||| || ||||| ||| |||||| Sbjct 1061229 GGTAACCTGGATGCCATGCGCGATTGGGGATATGCAAAAGACTATGTAGAATGTATGTGG 1061288 Query 194118 TTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGAACAGTATTCT 194177 |||||| | ||| | ||| ||| || || | |||||||||||||||||| | |||| Sbjct 1061289 TTAATGCTACAATATGATACACCGGAGGACTTCGTGATTGCTACAGGTGAATATCATTCC 1061348 Query 194178 GT 194179 || Sbjct 1061349 GT 1061350 Score = 181 bits (200), Expect = 2e-40 Identities = 376/556 (68%), Gaps = 4/556 (1%) Strand=Plus/Plus Query 193635 GTTGAACCTGCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAG 193694 ||| | |||| ||| || |||||||||| |||||| ||||||||||| ||||| ||||| Sbjct 345176 GTTCAGCCTGATGAAATTTATAATCTTGCTGCTCAGAGTCATGTTAAGGTTTCTTTTGAC 345235 Query 193695 ATGCCAGAGTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTT 193754 | || || ||||| || | ||||||| | || || | | || | ||||| || Sbjct 345236 GTTCCTGAATATACAGCTGAATCTGATGCTGTTGGTACGTTGCGTATGTTAGAAGCTATT 345295 Query 193755 CGTATGTTGGGAATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTAT 193814 ||||| | || |||||||| | | || || || || || || ||||| ||| Sbjct 345296 CGTATTCTTGGTTTGGAGAAAAAGGCAAAAATTTACCAAGCTTCCACATCTGAACTTTAT 345355 Query 193815 GGTGGTGTTCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTAT 193874 || |||| | ||| | | ||||| || || || | || || || |||||| Sbjct 345356 GGGAAAGTTCAGGAGGTTCCTCAAAAGGAAACGACGCCTTTCTACCCGCGTTCACCTTAT 345415 Query 193875 GGTGTAGCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTC 193934 ||||| || || |||||||| |||||| | ||||||||||||||| |||||| | Sbjct 345416 GGTGTTGCCAAACAGTATGGTTTTTGGATTACTAAGAATTATCGTGAGAGCTATGGAATG 345475 Query 193935 CACGCTAGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTA 193994 ||| |||||| | || ||||| ||| | | | ||||| ||||||||| Sbjct 345476 TTTGCTGTAAATGGTATCTTATTTAATCATGAAAGTGAGCGTCGTGGTGAAACATTTGTA 345535 Query 193995 ACTCGTAAGATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTAT 194054 ||||||||||| || || || ||| || || || || | | |||||| Sbjct 345536 ACTCGTAAGATCACTTTAGCGGCGGCTCGTATCGCTAAAGGTTTCCAAGATAAGCTTTAT 345595 Query 194055 CTTGGTAATCTT--AATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGA 194112 || ||||| ||| | | | | | || |||||| | || ||||||||||| ||| | Sbjct 345596 CTGGGTAA-CTTGGACTCATTA-CGTGACTGGGGATATGCTAAGGATTATGTAGAATGTA 345653 Query 194113 TGTGGTTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGAACAGT 194172 ||||| |||| || ||||| || || || |||| ||| |||||||| || ||| | Sbjct 345654 TGTGGCTAATATTACAACATGAAACTCCTGAAGATTTTGTAATTGCTACTGGAGAAATGC 345713 Query 194173 ATTCTGTTAGAGACTT 194188 || ||||| | || || Sbjct 345714 ATACTGTTCGTGAATT 345729 >seq126 Length=3533043 Score = 183 bits (202), Expect = 5e-41 Identities = 498/759 (66%), Gaps = 39/759 (5%) Strand=Plus/Minus Query 193436 AGCATTAATAACAGGCATAACTGGGCAGGATGGATCTTATCTTGCCGAGTTTCTTTTGTC 193495 ||||||||||||||| || || || || || || | ||||| | || | | | | Sbjct 1099067 AGCATTAATAACAGGGATTACAGGACAAGACGGGGCGTATCTGTCAGAATATTTAATAAA 1099008 Query 193496 TAAGGGATATGAAGTTCATGGTATTGTAAGGAGAAGTTCCCTAATCAATACTCATAGAAT 193555 | |||||| ||||||||| || ||| || |||| | | ||||| || | || Sbjct 1099007 AAGAGGATATACAGTTCATGGAATAAAAAGACGAGCTTCCATGTTTAATACAGATCGGAT 1098948 Query 193556 TGATCATATCTATGAGAAG-------------------ATC--ACTCTTCATTATGGAGA 193594 ||||||| | ||| || | ||| | ||||||||| ||||| Sbjct 1098947 TGATCATTTGTATCAGGATCCACATTTGGAAAACAGGAATCTTATTCTTCATTACGGAGA 1098888 Query 193595 TCTAACTGATCCTGTAAATGTTATGGGTGTCATTAGGGCAGTTGAACCTGCTGAGATCTA 193654 | | || ||| || ||||| ||| | ||||| | | | | | || | || || || Sbjct 1098887 TATGACAGATTCTTTAAATCTTACCCGGATCATTGGAGAAATACAGCCCGACGAAATATA 1098828 Query 193655 TAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGAGTATACTTCTAA 193714 |||| | | |||||||||||||| ||||| ||||| | || || |||||| |||| Sbjct 1098827 TAATTTAGCAGCTCAAAGTCATGTAAAAGTAAGTTTTGACACTCCTGAATATACTGCTAA 1098768 Query 193715 TGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGGGAATGGAG-- 193772 ||| ||||||||||| || | | || | ||||| |||||| | ||| | | | Sbjct 1098767 TGTAGATGCTTTAGGCACATTACGCATTTTAGAAGCTGTTCGTTTATTGA-ACTTAACTT 1098709 Query 193773 -AAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGTGTTCTAGGCAC 193831 ||| | ||| || ||||| || || || ||| | || || || | || | Sbjct 1098708 CAAAAAC--TCGTATATATCAAGCCTCCACATCTGAATTATACGGATTAGTACAAGAAAT 1098651 Query 193832 TCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGCAAAGTTGTA 193891 ||| | | |||||| || || || ||||| | |||||||| |||||| || |||| Sbjct 1098650 TCCTCAAAAAGAAACTACGCCTTTCTATCCAAGAAGTCCTTATGCTGTAGCTAAAATGTA 1098591 Query 193892 TGGTTATTGGATCATCAAGAATTATCGTGAGTCATATG----GATTCCACGCTAGTTCTG 193947 || || ||||| | | ||||| | || | ||| | || || || | || Sbjct 1098590 TGCCTACTGGATTACCGTTAATTACAGAGAAGCCTATAATATGTTTGCATGCAA----TG 1098535 Query 193948 GTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATTA 194007 | ||||| || || || || ||||| ||||||||| |||||||| ||||||||| ||| Sbjct 1098534 GAATTCTTTTTAACCATGAGTCTCCTTTAAGAGGTGAAACATTTGTTACTCGTAAGGTTA 1098475 Query 194008 CACAAGGTTTATCTAAGATCTCTGTTGG-ATTACAGAAGAT-TCTTTATCTTGGTAATCT 194065 || || ||||| ||| || | || ||| | |||| | ||||| |||||||| Sbjct 1098474 CAAGAGCATTATCCCGGATTGCTTTAGGTATTCAAAAAGAAGTATTTATG--GGTAATCT 1098417 Query 194066 TAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAATGTT 194125 | || | || ||||| ||||| || |||||| | |||| |||| | || | Sbjct 1098416 TTCCAGCCAGCGCGACTGGGGGCACGCCAAAGATTATATCAAAGCAATGTATCTGATACT 1098357 Query 194126 GCAACAGGATGAACCCGATGATTATGTGATTGCTACAGG 194164 ||||||||| || ||||||||||| |||||||| || Sbjct 1098356 TCAACAGGATACTCCGGATGATTATGTCATTGCTACCGG 1098318 Score = 129 bits (142), Expect = 9e-25 Identities = 266/389 (68%), Gaps = 10/389 (3%) Strand=Plus/Minus Query 194584 AAACCTGAGTATGTATTTCTTGCTGCTGCTAAGGTAGGTGGTATAGGTGGTAACTCTACC 194643 || ||||||||||||||||| ||||| ||||| |||||||| || | | |||| ||| Sbjct 1100004 AAGCCTGAGTATGTATTTCTGGCTGCCGCTAAAGTAGGTGGAATTGTAGCTAACAACACC 1099945 Query 194644 TATCCTGCCGATTTCATCTATGACAATCTGATGATTCAGACAAATGTTATTGATGCTGCA 194703 ||| | | || || ||||| || || ||||||| |||||||| |||| | Sbjct 1099944 TATAGGGGGCAATTTATATATGAAAACCTTCAAATTCAGAATAATGTTATCCATGCATCT 1099885 Query 194704 TATCGTAATGGAGTTAAGAAACTATTGTTTCTAGGTTCATCTTGCATCTATCC--TA-AG 194760 ||| ||||||| || || || || || |||| ||| | || |||||||| || | Sbjct 1099884 TATAAATATGGAGTAAAAAAGCTGTTATTCTTAGGGTCAACCTGTATCTATCCGGTAGAA 1099825 Query 194761 TTTCCAAAGATACCTATTACAGAGGATCAGTTACTTGCTAGTCCTTTGGAAGAATCTAAT 194820 | ||| | ||| || | ||| ||| ||| | | ||| |||||| | | ||| Sbjct 1099824 TCTCCTCA---ACCGATGAGAGAAGATTGTTTATTGACATCTCCATTGGAATATACAAAT 1099768 Query 194821 AGTGCTTATGCAATTGCAAAGATAGCAGGTATGAGGATGTGTCA-AGC-ATATCGTCAGC 194878 | ||||| ||||| || |||||||| || | ||||||| | ||| ||| | | | Sbjct 1099767 GAACCCTATGCTATTGCCAAAATAGCAGGCATAAAGATGTGTGAGAGCTATAACTT--AC 1099710 Query 194879 AGTATGGATTTAATGCAATATCATTAATGCCTACTAATCTATACGGACCTAATGATAATT 194938 | ||||| ||| || ||| | |||||||||||| | || || || |||||||| | Sbjct 1099709 AATATGGCACTAACTATATTTCAGTTATGCCTACTAATTTGTATGGCCCGAATGATAACT 1099650 Query 194939 TTGATATTAATAATGGTCATGTATTACCA 194967 | ||| | | || |||||||| ||| Sbjct 1099649 TCGATCTGGAGAAGTCGCATGTATTGCCA 1099621 >seq95 Length=1800565 Score = 178 bits (196), Expect = 2e-39 Identities = 281/398 (71%), Gaps = 6/398 (2%) Strand=Plus/Plus Query 193797 TCTACCAGCGAACTGTATGGTGGTGTTCTAGGCACTCCACTATCAGAAACCACACCATTT 193856 |||||| ||||| |||||| || | || || |||| | ||| |||||||| ||| Sbjct 668925 TCTACCTCTGAACTCTATGGTTTAGTCCAAGAAACACCACAAAAAGAGACCACACCTTTT 668984 Query 193857 CATCCACGCTCTCCTTATGGTGTAGCAAAGTTGTATGGTTATTGGATCATCAAGAATTAT 193916 | ||||| || ||||||| | || || | |||| ||||||||| | | || || Sbjct 668985 TACCCACGTTCGCCTTATGCAGCGGCTAAACTTTATGCTTATTGGATTACCGTTAACTAC 669044 Query 193917 CGTGAGTCATATGGATTCCACGCTAGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGA 193976 ||||| | ||||| | | || || ||| ||| | || || || ||||| ||| | Sbjct 669045 CGTGAAGCCTATGGTATGTATGCCTGTAATGGGATTTTGTTTAACCATGAATCACCACGC 669104 Query 193977 AGAGGTGAGACATTTGTAACTCGTAAGATTACACAAGGTTTATCTAAGATCTCTGTTGGA 194036 | |||||||| ||||| |||||||| || || | |||||| | || || | || Sbjct 669105 CGTGGTGAGACCTTTGTGACTCGTAAAATAACTCGTGGTTTAGCCAATATTGCGCAAGGT 669164 Query 194037 TTACAGAAGATTCTT-TATCTTGGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAA 194095 ||| | | || ||| || |||||||||||||| || | | |||||||| || || || Sbjct 669165 TTAGAACA-ATGCTTATACCTTGGTAATCTTAACGCATTGCGCGATTGGGGGCATGCCAA 669223 Query 194096 GGATTATGTT--GAAGCGATGTGGTTAATGTTGCAACAGGATGAACCCGATGATTATGTG 194153 |||||| | || || ||| ||||||||||||||| || |||| || |||| ||| Sbjct 669224 AGATTATATACGGATGCAATG--GTTAATGTTGCAACAAGAGCAACCTGAGGATTTTGTA 669281 Query 194154 ATTGCTACAGGTGAACAGTATTCTGTTAGAGACTTTGT 194191 ||||| || || | |||||||| ||||| || ||||| Sbjct 669282 ATTGCCACTGGGGTGCAGTATTCGGTTAGGGAGTTTGT 669319 >seq1599 Length=3738065 Score = 165 bits (182), Expect = 1e-35 Identities = 362/540 (67%), Gaps = 2/540 (0%) Strand=Plus/Minus Query 193641 CCTGCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCA 193700 |||| ||| || |||||||| | |||||||||||||| ||||| ||||| | || Sbjct 238820 CCTGATGAAATTTATAATCTGGCGGCTCAAAGTCATGTCAAAGTAAGTTTTGATGTACCT 238761 Query 193701 GAGTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATG 193760 || ||||| | ||| |||||| | ||||| ||| | || | ||||| | ||||| Sbjct 238760 GAATATACAGCGGATGCCGATGCTATCGGAACACTTCGTTTATTGGAAGCGATACGTATT 238701 Query 193761 TTGGGAATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGT 193820 || |||||||||||| | || || || ||||| ||||| |||||| | | | | Sbjct 238700 TTAGGAATGGAGAAAAAAACCCGTATTTACCAGGCTTCTACATCCGAACT-TTTCGGATT 238642 Query 193821 GTTCTAGGCACT-CCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGT 193879 | | ||| | | |||| | ||| || || || || |||| || || |||||||| || Sbjct 238641 GGTACAGGAAGTGCCACAAAAAGAGACAACGCCTTTCTATCCGCGTTCACCTTATGGCGT 238582 Query 193880 AGCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGC 193939 ||| ||| || || | |||||| | ||||||||||| || |||||| | | || Sbjct 238581 AGCGAAGCAATACGGATTTTGGATTACGAAGAATTATCGCGAAAGTTATGGAATGTATGC 238522 Query 193940 TAGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCG 193999 | | || ||| | |||||||| ||| | | | || || || ||||| || || Sbjct 238521 TGTTAACGGCATTTTATTCAATCATGAAAGCGAACGGCGCGGAGAAACGTTTGTTACCCG 238462 Query 194000 TAAGATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTTGG 194059 ||||| | || | | || | || | ||| | | || ||| | || Sbjct 238461 GAAGATATCGTTAGCAGCAGCGCGTATTGCGCAGGGGTATCAGGACAAGCTATATGTGGG 238402 Query 194060 TAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTT 194119 || ||| |||| | | |||||||| | || || |||||| ||||| |||||| | Sbjct 238401 AAACCTTGATGCGCATCGTGATTGGGGTTATGCGAAAGATTATATTGAATGTATGTGGCT 238342 Query 194120 AATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGAACAGTATTCTGT 194179 ||| |||| || || ||||| |||| |||||||||||| ||||| | ||||||| Sbjct 238341 TATGCTGCAGCACGAAACGCCCGAAGATTTTGTGATTGCTACCGGTGAGATGCATTCTGT 238282 >seq2330 Length=1066040 Score = 163 bits (180), Expect = 5e-35 Identities = 494/763 (65%), Gaps = 35/763 (5%) Strand=Plus/Minus Query 193430 GAAAAAAGCATTAATAACAGGCATAACTGGGCAGGATGGATCTTATCTTGCCGAGTTTCT 193489 ||||| |||||||| |||||| | || || || |||||| | ||||| | || | | | Sbjct 492047 GAAAATTGCATTAATCACAGGCGTTACAGGACAAGATGGAGCGTATCTATCTGAATATTT 491988 Query 193490 TTTGTCTAAGGGATATGAAGTTCATGGTATTGTAAGGAGAAGTTCCCTAATCAATACTCA 193549 | || |||||| |||||||| || ||| ||| || || | |||||| | Sbjct 491987 GATAAAAAAAGGATATACGGTTCATGGAATAAAAAGAAGATCATCTCTTTTTAATACTGA 491928 Query 193550 TAGAATTGATCATATCTATGAG---------------------AAGATCACTCTTCATTA 193588 | ||||||||| | ||| || || || | ||||||||| Sbjct 491927 ACGTATTGATCATTTATATCAGGATCCTCATGATGAGAATCGAAATATGATTCTTCATTA 491868 Query 193589 TGGAGATCTAACTGATCCTGTAAATGTTATGGGTGTCATTAGGGCAGTTGAACCTGCTGA 193648 ||| ||| | || ||| | ||| ||| || | || | | ||| | |||| || Sbjct 491867 TGGTGATATGACAGATAGCATGAATCTTACCCGTATAGTTGGAGATGTTCAGCCTGACGA 491808 Query 193649 GATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGAGTATAC 193708 ||||| ||||||| || || ||||| || || |||||| | || || ||||| Sbjct 491807 AATCTACAATCTTGCAGCAATGAGCCATGTCAAGGTCAGCTTTGATACACCTGAATATAC 491748 Query 193709 TTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGG---- 193764 | |||||| |||| | | ||||| ||| | |||||||||| || | | | Sbjct 491747 TGCTAATGCAGATGGTATTGGAACACTTCGTTTACTTGAAGCTGTCAGATTACTCAATCT 491688 Query 193765 GAATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGG--TGGTGT 193822 || || | ||| | || ||||||||||| || ||| || ||||| ||||| Sbjct 491687 GACTGAAAAAACAAAA----ATATATCAGGCATCAACATCCGAGCTTTATGGATTGGTG- 491633 Query 193823 TCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGC 193882 | || | || | | |||||| || || ||| |||| | ||||||| ||||| Sbjct 491632 -CAAGAGATACCTCAAAAAGAAACAACCCCGTTTTATCCTAGAAGCCCTTATGCCGTAGC 491574 Query 193883 AAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAG 193942 || | |||| |||||||| | ||||| | || | || ||| | || || || Sbjct 491573 CAAACTTTATGCATATTGGATTACTGTAAATTACAGAGAAGCTTACGGAATGCATGCCAG 491514 Query 193943 TTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAA 194002 | |||||| || || ||||| ||||||||| | | || || || |||||||| || || Sbjct 491513 TAATGGTATACTGTTTAATCATGAATCTCCACTACGGGGAGAAACGTTTGTAACCCGAAA 491454 Query 194003 GATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTTGGTAA 194062 |||||| | | || || | |||| |||||||| | | | | | ||||| Sbjct 491453 AGTTACACGTGCGGTTTCCCGTATTGCGCTTGGTTTACAGAAAAAAGTGTTTATGGGTAA 491394 Query 194063 TCT-TAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAA 194121 ||| | || ||||| || |||||||| || || |||||| || |||| |||| | | Sbjct 491393 TCTATCCAGC-AAGAGAGACTGGGGACATGCTAAAGATTATATTAAAGCCATGTATCTTA 491335 Query 194122 TGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGG 194164 | ||||| || ||| ||||||||||| || || | ||||| Sbjct 491334 TTTTGCAGCAAGATACGCCCGATGATTACGTTATCTCAACAGG 491292 Score = 125 bits (138), Expect = 1e-23 Identities = 247/364 (68%), Gaps = 6/364 (2%) Strand=Plus/Minus Query 194583 GAAACCTGAGTATGTATTTCTTGCTGCTGCTAAGGTAGGTGGTATAGGTGGTAACTCTAC 194642 ||||||||| ||||| ||||| |||||||||||||| || || || | || ||| ||| Sbjct 490719 GAAACCTGATTATGTTTTTCTAGCTGCTGCTAAGGTTGGAGGAATTGTTGCCAACAATAC 490660 Query 194643 CTATCCTGCCGATTTCATCTATGACAATCTGATGATTCAGACAAATGTTATTGATGCTGC 194702 || | | || || ||||| ||||||||||| || | |||||||| || | Sbjct 490659 TTACAGAGGGCAATTTATATATGAAAATCTGATGATACAAAATAATGTTATACATCAGTC 490600 Query 194703 ATATCGTAATGGAGTTAAGAAACTATTGTTTCTAGGTTCATCTTGCATCTATCCTA---A 194759 |||| ||| ||||| ||| || | ||| ||||| ||||| |||||||||| | Sbjct 490599 ATATGTAAATAATGTTAAAAAATTAGTATTTTTAGGTAGTTCTTGTATCTATCCTAAAGA 490540 Query 194760 GTTTCCAAAGATACCTATTACAGAGGATCAGTTACTTGCTAGTCCTTTGGAAGAATCTAA 194819 |||| | ||| || | ||| ||| ||| | || | |||| ||| | | || Sbjct 490539 AGCTCCACA---ACCAATGAAAGAAGATTCTTTATTGACTGGCACTTTAGAATATACAAA 490483 Query 194820 TAGTGCTTATGCAATTGCAAAGATAGCAGGTATGAGGATGTGTCAAGCATATCGTCAGCA 194879 | | |||||||| |||||||| || || ||| |||||| || ||| | || Sbjct 490482 TGAACCATATGCAATAGCAAAGATTGCGGGACTGAAAATGTGTGAAAGCTATAATATTCA 490423 Query 194880 GTATGGATTTAATGCAATATCATTAATGCCTACTAATCTATACGGACCTAATGATAATTT 194939 || ||| ||| ||| | | ||||| || ||| | || |||||||||||||| || Sbjct 490422 ATACGGAACAAATTTTATAGCTGTGATGCCGACAAATTTGTATGGACCTAATGATAACTT 490363 Query 194940 TGAT 194943 | || Sbjct 490362 TAAT 490359 >seq2441 Length=2995558 Score = 147 bits (162), Expect = 4e-30 Identities = 512/788 (65%), Gaps = 57/788 (7%) Strand=Plus/Minus Query 193422 TAAATAATGAAAAAAGCATTAATAACAGGCATAACTGGGCAGGATGGATCTTATCTT-GC 193480 ||||| | |||| |||| | || ||||| || |||||||| ||||| || | |||| || Sbjct 459821 TAAATGAAAAAAATAGCACTTATTACAGGAATCACTGGGCAAGATGGTTCCT-TCTTAGC 459763 Query 193481 CGAGTTTCTTTTGTCTAAGGGATATGAAGTTCATGGTATTGTAAGGAGAAGTTCCCTAAT 193540 |||||| | || || ||||||||||| ||||| || | | | ||| | | Sbjct 459762 TGAGTTTTTATTAGAAAAAGGATATGAAGTACATGGAATACTTCGACGTTCTTCTTCATT 459703 Query 193541 CAATACTCATAGAATTGATCAT----ATCTA-------------------TGA------G 193571 ||||||| | | ||||| ||| ||||| ||| | Sbjct 459702 CAATACTTCTCGCATTGAACATCTATATCTAGATGAATGGGTGCGAGATATGAAACAACG 459643 Query 193572 AAGATCACT----CTTCATTATGGAGATCTAACTGATCCT-GTAAATGTTATGGGTGTCA 193626 ||||| | | |||||||| |||||| | || ||| | || | | || || ||| Sbjct 459642 AAGATTAATAAATCTTCATTACGGAGATTTGACAGATAGTAGTTCCT-TGATTCGTATCA 459584 Query 193627 TTAGGGCAGTTGA----ACCTGCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAA 193682 || ||| ||| ||| | ||| || |||||| | | |||||||| ||||| ||| Sbjct 459583 TT----CAGCTGATAAAACCAGATGAAATATATAATTTGGCAGCTCAAAGCCATGTAAAA 459528 Query 193683 GTTTCCTTTGAGATGCCAGAGTATACTTCT-AATGTTGATGCTTTAGGAACTCTTAGAAT 193741 ||||| ||||| |||| || ||||| || ||||| |||||| | || || | | || Sbjct 459527 GTTTCTTTTGATGTGCCTGAATATACAGCTGAATGT-GATGCTATTGGTACATTACGGAT 459469 Query 193742 ACTTGAAGCAGTTCGTATGTTGGGAATGGAGAAAGATGTTCGCATCTATCAGGCATCTAC 193801 | ||||| ||||||| | || | || ||| | || ||||| || ||||| Sbjct 459468 GTTGGAAGCTATTCGTATTCTTGGGTTAGAAAAAAAGACAAAGATATATCAAGCTTCTAC 459409 Query 193802 CAGCGAACTGTATGGTGGTGTTCTAGGCACT-CCACTATCAGAAACCACACCATTTCATC 193860 ||| | ||||| || | ||| | | |||| | ||| || || || ||| ||| Sbjct 459408 TTCTGAATTATATGGAAAAGTGC-AGGAAGTACCACAAAAAGAGACTACTCCTTTTTATC 459350 Query 193861 CACGCTCTCCTTATGGTGTAGCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTG 193920 | || ||||| ||||| ||||| || ||||| || |||||||| || || ||| | | Sbjct 459349 CTCGTTCTCCATATGGAGTAGCCAAACAGTATGCTTTTTGGATCACTAAAAACTATAGGG 459290 Query 193921 AGTCATATGGATTCCACGCTAGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAG 193980 || ||||| | ||| ||||||||| || ||||| ||| | ||| || | Sbjct 459289 AGAGCTATGGTATTTTTGCTGTGAATGGTATTCTTTTTAATCATGAAAGTGAAAGGAGGG 459230 Query 193981 GTGAGACATTTGTAACTCGTAAGATTACACAAGGTTTATCTAAGATCTCTGTTGGAT-TA 194039 | || ||||||||||||||||||||| || || | | || | |||| | Sbjct 459229 GAGAAACATTTGTAACTCGTAAGATTTCATTAGCAGCTGCCAGAATTGCGCAAGGATATC 459170 Query 194040 CAGAAGATTCTTTATCTTGGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGAT 194099 |||| | | | ||| | || ||||| ||| || | |||||||| | || || ||| Sbjct 459169 AAGAAAAAT-TGTATTTAGGAAATCTAAATTCTCTACGTGATTGGGGTTATGCGAAAGAT 459111 Query 194100 TATGTTGAAGCGATGTGGTTAATGTTGCAACAGGATGAA---CCCGATGATTATGTGATT 194156 ||| |||| |||||| ||| ||| |||| ||||| || || |||| ||| || Sbjct 459110 TATATTGAGTGTATGTGGCTAA---TGCTACAGCATGAAACTCCTGAAGATTTTGTAATA 459054 Query 194157 GCTACAGG 194164 || || || Sbjct 459053 GCCACGGG 459046 >seq875 Length=1099013 Score = 132 bits (146), Expect = 8e-26 Identities = 351/532 (66%), Gaps = 12/532 (2%) Strand=Plus/Plus Query 193639 AACCTGCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGC 193698 |||||| ||| || |||||||| | || || ||||| |||||| |||||| | Sbjct 244855 AACCTGATGAAATATATAATCTGGCAGCAATGAGCCATGTGAAAGTTAGCTTTGATTCTC 244914 Query 193699 CAGAGTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTA 193758 | || ||| |||||| ||||| |||| ||| | || | ||||| || ||| Sbjct 244915 CGGAATATGTAGCTAATGCTGATGGAATAGGGGTACTTCGTATTTTGGAAGCTGTACGTC 244974 Query 193759 TGTTGGGAATGGAG----AAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTAT 193814 ||||| ||| || ||| | || || |||||||| || || || || ||| Sbjct 244975 TGTTG--AATTTAGTTTCAAAAACA--CGTATTTATCAGGCTTCAACATCAGAGCTTTAT 245030 Query 193815 GGTGGTGTTCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTAT 193874 || || | | | |||| | |||||| || ||||| |||| | || ||| Sbjct 245031 GGCTTAGTGCAGGAGATCCCACAAAAAGAAACAACTCCATTCTATCCCAGAAGCCCGTAT 245090 Query 193875 GGTGTAGCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTC 193934 | ||| ||||| |||||| ||||||||| | ||||| | ||| | || | Sbjct 245091 GCTGTGGCAAAAATGTATGCTTATTGGATAACTGTAAATTACAGAGAGGCCTACAATATG 245150 Query 193935 CACGCTAGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTA 193994 || ||| | ||| ||| | || ||||| ||||| ||| ||||||||| || ||||| Sbjct 245151 CATGCTTCTAATGGCATTTTGTTTAATCATGAATCACCATTAAGAGGTGAAACTTTTGTG 245210 Query 193995 ACTCGTAAGATTACACAAG--GTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTT 194052 || || || | |||| | |||| | | | | || |||| | ||||| || | | Sbjct 245211 ACACGAAAAGTAACACGTGCGGTTTCCCGTATAGCGCT--TGGAATGCAGAATATGGTAT 245268 Query 194053 ATCTTGGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGA 194112 || | || ||||| | | || | ||||||||||| || || |||||| | || | Sbjct 245269 ATATGGGAAATCTATCTTCAAAACGTGATTGGGGACATGCTAAAGATTATATCCGTGCAA 245328 Query 194113 TGTGGTTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGG 194164 ||| ||| |||||||| ||| |||| ||||||||||| || || ||||| Sbjct 245329 TGTATGAAATATTGCAACAAGATCAACCAGATGATTATGTTATAGCAACAGG 245380 >seq788 Length=584067 Score = 111 bits (122), Expect = 3e-19 Identities = 198/284 (70%), Gaps = 4/284 (1%) Strand=Plus/Plus Query 193635 GTTGAACCTGCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAG 193694 ||| |||||| ||| || |||||||||| || ||| ||||| ||||| || ||||| Sbjct 392796 GTTCAACCTGATGAAATTTATAATCTTGCAGCACAATCACATGTAAAAGTATCATTTGAT 392855 Query 193695 ATGCCAGAGTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTT 193754 || || || ||||| | | | ||||| ||||||| | || |||| ||||| || Sbjct 392856 ATTCCCGAATATACGGCAGAAATAGATGCCATAGGAACATTAAGGTTACTCGAAGCCGTG 392915 Query 193755 CGTATGTTGGGAATGGAGAA-AGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTA 193813 | || | | |||| || | ||| || | |||||||| ||||| ||||| || Sbjct 392916 AGAATTCTAAAACTGGAAAAGAAATGC-CGGGTATATCAGGCTTCTACTTCAGAACTTTA 392974 Query 193814 TGGTGGTGTTCTAGGCACT-CCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTT 193872 ||| || | ||| | | || | | ||| |||||||| ||| |||| | ||||| Sbjct 392975 TGGCTTGGTAC-AGGAAATACCTCAAAAAGAGACCACACCGTTTTATCCCAGAAGTCCTT 393033 Query 193873 ATGGTGTAGCAAAGTTGTATGGTTATTGGATCATCAAGAATTAT 193916 |||||||||| ||| || |||| |||||| | ||||||||| Sbjct 393034 ATGGTGTAGCTAAGCAATACGGTTTTTGGATTACAAAGAATTAT 393077 >seq1464 Length=221826 Score = 89.7 bits (98), Expect = 8e-13 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 193580 TCTTCATTATGGAGATCTAACTGATCCTGTAAATGTTATGGGTGTCATTAGGGCAGTTGA 193639 ||| |||||||||||| |||| || | | ||| ||| | | ||| | | | || | Sbjct 151083 TCTACATTATGGAGATTTAACAGACTCCATGAATCTTACAAGAATTATTGGAGAAATTAA 151142 Query 193640 ACCTGCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCC 193699 |||| ||| || |||||||||| ||| |||||||| |||||| |||||| | || Sbjct 151143 GCCTGATGAAATATATAATCTTGCTGCCATGAGTCATGTCAAAGTTAGCTTTGATACTCC 151202 Query 193700 AGAGTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCG 193756 || |||||| | ||||| |||| ||||| ||| | | || || ||||| || || Sbjct 151203 TGAATATACTGCCAATGTAGATGGATTAGGCACTTTGCGTATTCTGGAAGCTGTCCG 151259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807304938643520