Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq714 125 8e-24
>seq714
Length=734366
Score = 125 bits (138), Expect = 8e-24
Identities = 116/147 (79%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 21124 TATTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCAT 21183
|| ||||||||||||||| |||| ||||||||| |||||||| || | ||| | ||
Sbjct 38265 TAGTTAAAAATCAGCATCCAATGTGAAAACATTTTCTTCTTTCTTAGCCATCACACCACA 38324
Query 21184 TTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGA 21243
||| ||||| || | |||| | || ||||| ||||| ||||| ||||||||||||||
Sbjct 38325 TTTCTGATACTCTCCAACTTTCTTCTCGAAGAAATTCGTCTTGCCTTCCAATGATATGTG 38384
Query 21244 TTCCATAAAATCAAATGGATTTTCAGA 21270
|||||| || || || |||||||| ||
Sbjct 38385 TTCCATGAAGTCGAACGGATTTTCTGA 38411
Score = 87.8 bits (96), Expect = 2e-12
Identities = 131/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 21766 ACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGC 21825
||| |||||||| ||||| | |||||| || || || ||||| || || |||||||||||
Sbjct 47776 ACTGTACATTTCTGAATGAACATTTTCCATTGCAATTTGAAAGCCATAGAAACATCTTGC 47835
Query 21826 CTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATC 21885
|||| ||| || || |||| || | | |||||||||||| ||||||||
Sbjct 47836 TTCTGTGACTTGTACTTCTTGGCTGAATCTTTCTACAAGGTTTTCATTTACAATTCCATC 47895
Query 21886 ACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTT 21945
|| ||||| ||||| | || | | ||| |||| | ||| | || ||| | |||
Sbjct 47896 TGATGCTGCAAAGAATGCAAGTACGTGTGATATGAAATGCCTTTCATCATTTGTAAGTTT 47955
Query 21946 TTTCCA 21951
|| |||
Sbjct 47956 TTCCCA 47961
Score = 84.2 bits (92), Expect = 2e-11
Identities = 155/222 (70%), Gaps = 8/222 (4%)
Strand=Plus/Plus
Query 21500 TCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTT 21559
|||||||| || ||||| || || || || || ||||| | |||||| || ||
Sbjct 43904 TCATCCCTTGAAATCAATTCGTTGCTGAAAGTCAATCCTGGCATAAGTCCTCTTTTCTTC 43963
Query 21560 AACCAAAATATTGACGCAAATGCTCCTGAA-AAGAAAATGCCCTCAACGGCAGCAAATGC 21618
| ||| || ||||| ||||| ||||| | | |||||||| ||||| || |||||||||||
Sbjct 43964 AGCCAGAAAATTGAAGCAAA-GCTCCCGGAGAAGAAAATACCCTCCACTGCAGCAAATGC 44022
Query 21619 AACTAATCGTTCACCGTATGT---AGATTCTTTATCCAATATCCATTTTTCTGCCCATTT 21675
|| | || || || ||||| || || || | || ||||| | ||||| |
Sbjct 44023 TACCACTCTCTCGCCATATGTTGCAGTATCATT-TGCA--ATCCACTGAAGGGCCCAATC 44079
Query 21676 TGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA 21717
||| || | ||| | ||| ||||| |||||||| || ||
Sbjct 44080 TGCTTTCTTTTTTACACACGGCATTGTTTCAATAGCATTAAA 44121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531735963942080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |