Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq714 125 8e-24 >seq714 Length=734366 Score = 125 bits (138), Expect = 8e-24 Identities = 116/147 (79%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 21124 TATTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCAT 21183 || ||||||||||||||| |||| ||||||||| |||||||| || | ||| | || Sbjct 38265 TAGTTAAAAATCAGCATCCAATGTGAAAACATTTTCTTCTTTCTTAGCCATCACACCACA 38324 Query 21184 TTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGA 21243 ||| ||||| || | |||| | || ||||| ||||| ||||| |||||||||||||| Sbjct 38325 TTTCTGATACTCTCCAACTTTCTTCTCGAAGAAATTCGTCTTGCCTTCCAATGATATGTG 38384 Query 21244 TTCCATAAAATCAAATGGATTTTCAGA 21270 |||||| || || || |||||||| || Sbjct 38385 TTCCATGAAGTCGAACGGATTTTCTGA 38411 Score = 87.8 bits (96), Expect = 2e-12 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 21766 ACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGC 21825 ||| |||||||| ||||| | |||||| || || || ||||| || || ||||||||||| Sbjct 47776 ACTGTACATTTCTGAATGAACATTTTCCATTGCAATTTGAAAGCCATAGAAACATCTTGC 47835 Query 21826 CTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATC 21885 |||| ||| || || |||| || | | |||||||||||| |||||||| Sbjct 47836 TTCTGTGACTTGTACTTCTTGGCTGAATCTTTCTACAAGGTTTTCATTTACAATTCCATC 47895 Query 21886 ACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTT 21945 || ||||| ||||| | || | | ||| |||| | ||| | || ||| | ||| Sbjct 47896 TGATGCTGCAAAGAATGCAAGTACGTGTGATATGAAATGCCTTTCATCATTTGTAAGTTT 47955 Query 21946 TTTCCA 21951 || ||| Sbjct 47956 TTCCCA 47961 Score = 84.2 bits (92), Expect = 2e-11 Identities = 155/222 (70%), Gaps = 8/222 (4%) Strand=Plus/Plus Query 21500 TCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTT 21559 |||||||| || ||||| || || || || || ||||| | |||||| || || Sbjct 43904 TCATCCCTTGAAATCAATTCGTTGCTGAAAGTCAATCCTGGCATAAGTCCTCTTTTCTTC 43963 Query 21560 AACCAAAATATTGACGCAAATGCTCCTGAA-AAGAAAATGCCCTCAACGGCAGCAAATGC 21618 | ||| || ||||| ||||| ||||| | | |||||||| ||||| || ||||||||||| Sbjct 43964 AGCCAGAAAATTGAAGCAAA-GCTCCCGGAGAAGAAAATACCCTCCACTGCAGCAAATGC 44022 Query 21619 AACTAATCGTTCACCGTATGT---AGATTCTTTATCCAATATCCATTTTTCTGCCCATTT 21675 || | || || || ||||| || || || | || ||||| | ||||| | Sbjct 44023 TACCACTCTCTCGCCATATGTTGCAGTATCATT-TGCA--ATCCACTGAAGGGCCCAATC 44079 Query 21676 TGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA 21717 ||| || | ||| | ||| ||||| |||||||| || || Sbjct 44080 TGCTTTCTTTTTTACACACGGCATTGTTTCAATAGCATTAAA 44121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531735963942080