Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq495 150 5e-31 seq373 96.9 9e-15 seq211 93.3 1e-13 seq179 86.0 2e-11 >seq495 Length=1347633 Score = 150 bits (166), Expect = 5e-31 Identities = 225/314 (72%), Gaps = 8/314 (3%) Strand=Plus/Minus Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547 ||||||||| || ||||| || |||||||||||||| |||||||| || | |||||| Sbjct 721998 AGGTGATCTAGGTCCAGTGTATGGATTTCAATGGCGGCACTTTGGAGCTAAGTACAAAGA 721939 Query 111548 CATGCACGACTCATATGATTC---ACAGGGAACTGATCAATTACAGAATGTCATTGATCA 111604 || | ||| | || |||| |||||| | ||||||||| | || ||||| Sbjct 721938 TATAAA-GAC--AGATTATTCTGGACAGGGCATTGATCAATTGTTGCGCGTGATTGAAAT 721882 Query 111605 AATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATT 111664 || |||||||| || | |||||| ||||| |||||||| ||||| ||| || | Sbjct 721881 TATCAAGAACAAGCCTGATGATCGTCGTATTATCATGAGTGCTTGGAATCCAGTTGATAT 721822 Query 111665 GGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTA-CACGACGGGA 111723 |||||||| || ||||||||||| | | ||||| |||||| || | || Sbjct 721821 ACCTAAAATGGCTCTCCCACCATGTCACTGTCTCGTTCAGTTCTATGTAGCAGGCAAAGA 721762 Query 111724 TGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATA 111783 |||||| ||||| | || || || ||||||||||| || | ||||| || || ||| Sbjct 721761 -GCTTTCTTGCCAGTTATACCAACGTTCTGCTGATATGGGATTAGGTGTACCATTCAATG 721703 Query 111784 TTGCAAGTTACGCA 111797 |||||||||| ||| Sbjct 721702 TTGCAAGTTATGCA 721689 >seq373 Length=1274844 Score = 96.9 bits (106), Expect = 9e-15 Identities = 120/161 (75%), Gaps = 10/161 (6%) Strand=Plus/Plus Query 111645 GCATGGAACCCAAATGCATTGGAAAA---AATGGCACTTCCACCATGTCAT--CTTATGT 111699 || |||||||| |||||| | | | ||||||||| ||||| || ||| ||||| Sbjct 929365 GCTTGGAACCC---TGCATTAGTAGATGAAATGGCACTACCACCTTGCCATGCCTTATT- 929420 Query 111700 GCCAGTTTTATGTACACGACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATA 111759 ||| |||||||| || || | || ||||| || | |||||||| || ||||||| Sbjct 929421 -CCAATTTTATGTGGCAGATGGAAAACTATCATGTCAGTTATATCAGCGTTCAGCTGATA 929479 Query 111760 TTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTA 111800 || ||||||||||| ||||||||||| ||||| ||| || Sbjct 929480 TTTTCCTTGGTGTTCCCTTTAATATTGCTAGTTATGCATTA 929520 >seq211 Length=1809889 Score = 93.3 bits (102), Expect = 1e-13 Identities = 136/190 (72%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 364074 GTATGAATCGGAGGGAAAGGCTCGTAAGACAA-TTCCCGCACAGAAGCTATGGTTTGCCA 364132 |||||| || ||||| || | || || ||| || ||||| | |||||| ||||| Sbjct 911529 GTATGAGTCAGAGGGTAAATAT-GTGAGGCAAGTTAAGGCACAAACTTTATGGTATGCCA 911587 Query 364133 TCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACC 364192 || || || || | ||||| |||||||| || ||| |||| |||||| | ||||||| Sbjct 911588 TCTGTGAATCACAAGTAGAGACTGGAACACCATACATGCTGTATAAAGATGCTTGCAACC 911647 Query 364193 GCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTA 364252 | || |||||||||||| || | || |||||| | ||||| | || || || || Sbjct 911648 GAAAATCCAACCAGCAGAACTTGGGGACAATTAAATGCAGCAATTTGTGCACAGAAATAG 911707 Query 364253 TTGAATACAC 364262 | ||||| || Sbjct 911708 TGGAATATAC 911717 Score = 86.0 bits (94), Expect = 2e-11 Identities = 152/219 (69%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 364651 CAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCC 364710 |||| ||| | ||||||||||| ||| | | || ||| |||||| | | | | Sbjct 922414 CAGTATGACATGTGGAATGTCACACCAACAGACCTGTGGGACTGGGCT--GATCTGAAGA 922471 Query 364711 AACG--TTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTT 364768 |||| || |||||||| ||||||||| | || || |||||||| ||||||| Sbjct 922472 AACGTATTGCACAGCATGGTGTTCGCAACTCTTTGCTTCTTGCTCCCATGCCTACGGCTT 922531 Query 364769 CTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATT 364828 | ||||| || || | |||||||| || | || || || | |||| || | || | Sbjct 922532 CCACTGCTCAAATATTGGGAAACAATGAATCTTTTGAGCCATACACAACGAACATCTACT 922591 Query 364829 CACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATA 364867 || | | ||||| ||||||||||||| |||| ||||| Sbjct 922592 CAAGAAGAGTTCTGTCCGGAGAATTTCAGGTA--TAATA 922628 >seq179 Length=2312354 Score = 86.0 bits (94), Expect = 2e-11 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 111636 ATTATGAGTGCATGGAACCCAAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTT 111695 ||| | ||||||||||| || |||| |||||||| | || ||||| || Sbjct 182480 ATTGTTAGTGCATGGAATGTTGCTGATGTGGATAAAATGGCTTTGCCTCCATGCCACACA 182539 Query 111696 ATGTGCCAGTTTTATGTACACGACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCT 111755 || | |||||||||||| |||||| | | ||||||||| | ||||| ||| ||| Sbjct 182540 ATTTTTCAGTTTTATGTATCCGACGGAAAATTATCATGCCAACTTTATCAACGAAGTGCC 182599 Query 111756 GATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTAC 111805 ||| || ||| || || || |||||||||||| || ||||| ||||| Sbjct 182600 GATCTTTTTCTGGGAGTCCCTTTTAATATTGCATCATATGCACTCCTTAC 182649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302939592987344