Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq495 150 5e-31
seq373 96.9 9e-15
seq211 93.3 1e-13
seq179 86.0 2e-11
>seq495
Length=1347633
Score = 150 bits (166), Expect = 5e-31
Identities = 225/314 (72%), Gaps = 8/314 (3%)
Strand=Plus/Minus
Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547
||||||||| || ||||| || |||||||||||||| |||||||| || | ||||||
Sbjct 721998 AGGTGATCTAGGTCCAGTGTATGGATTTCAATGGCGGCACTTTGGAGCTAAGTACAAAGA 721939
Query 111548 CATGCACGACTCATATGATTC---ACAGGGAACTGATCAATTACAGAATGTCATTGATCA 111604
|| | ||| | || |||| |||||| | ||||||||| | || |||||
Sbjct 721938 TATAAA-GAC--AGATTATTCTGGACAGGGCATTGATCAATTGTTGCGCGTGATTGAAAT 721882
Query 111605 AATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATT 111664
|| |||||||| || | |||||| ||||| |||||||| ||||| ||| || |
Sbjct 721881 TATCAAGAACAAGCCTGATGATCGTCGTATTATCATGAGTGCTTGGAATCCAGTTGATAT 721822
Query 111665 GGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTA-CACGACGGGA 111723
|||||||| || ||||||||||| | | ||||| |||||| || | ||
Sbjct 721821 ACCTAAAATGGCTCTCCCACCATGTCACTGTCTCGTTCAGTTCTATGTAGCAGGCAAAGA 721762
Query 111724 TGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATA 111783
|||||| ||||| | || || || ||||||||||| || | ||||| || || |||
Sbjct 721761 -GCTTTCTTGCCAGTTATACCAACGTTCTGCTGATATGGGATTAGGTGTACCATTCAATG 721703
Query 111784 TTGCAAGTTACGCA 111797
|||||||||| |||
Sbjct 721702 TTGCAAGTTATGCA 721689
>seq373
Length=1274844
Score = 96.9 bits (106), Expect = 9e-15
Identities = 120/161 (75%), Gaps = 10/161 (6%)
Strand=Plus/Plus
Query 111645 GCATGGAACCCAAATGCATTGGAAAA---AATGGCACTTCCACCATGTCAT--CTTATGT 111699
|| |||||||| |||||| | | | ||||||||| ||||| || ||| |||||
Sbjct 929365 GCTTGGAACCC---TGCATTAGTAGATGAAATGGCACTACCACCTTGCCATGCCTTATT- 929420
Query 111700 GCCAGTTTTATGTACACGACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATA 111759
||| |||||||| || || | || ||||| || | |||||||| || |||||||
Sbjct 929421 -CCAATTTTATGTGGCAGATGGAAAACTATCATGTCAGTTATATCAGCGTTCAGCTGATA 929479
Query 111760 TTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTA 111800
|| ||||||||||| ||||||||||| ||||| ||| ||
Sbjct 929480 TTTTCCTTGGTGTTCCCTTTAATATTGCTAGTTATGCATTA 929520
>seq211
Length=1809889
Score = 93.3 bits (102), Expect = 1e-13
Identities = 136/190 (72%), Gaps = 2/190 (1%)
Strand=Plus/Plus
Query 364074 GTATGAATCGGAGGGAAAGGCTCGTAAGACAA-TTCCCGCACAGAAGCTATGGTTTGCCA 364132
|||||| || ||||| || | || || ||| || ||||| | |||||| |||||
Sbjct 911529 GTATGAGTCAGAGGGTAAATAT-GTGAGGCAAGTTAAGGCACAAACTTTATGGTATGCCA 911587
Query 364133 TCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACC 364192
|| || || || | ||||| |||||||| || ||| |||| |||||| | |||||||
Sbjct 911588 TCTGTGAATCACAAGTAGAGACTGGAACACCATACATGCTGTATAAAGATGCTTGCAACC 911647
Query 364193 GCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTA 364252
| || |||||||||||| || | || |||||| | ||||| | || || || ||
Sbjct 911648 GAAAATCCAACCAGCAGAACTTGGGGACAATTAAATGCAGCAATTTGTGCACAGAAATAG 911707
Query 364253 TTGAATACAC 364262
| ||||| ||
Sbjct 911708 TGGAATATAC 911717
Score = 86.0 bits (94), Expect = 2e-11
Identities = 152/219 (69%), Gaps = 6/219 (3%)
Strand=Plus/Plus
Query 364651 CAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCC 364710
|||| ||| | ||||||||||| ||| | | || ||| |||||| | | | |
Sbjct 922414 CAGTATGACATGTGGAATGTCACACCAACAGACCTGTGGGACTGGGCT--GATCTGAAGA 922471
Query 364711 AACG--TTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTT 364768
|||| || |||||||| ||||||||| | || || |||||||| |||||||
Sbjct 922472 AACGTATTGCACAGCATGGTGTTCGCAACTCTTTGCTTCTTGCTCCCATGCCTACGGCTT 922531
Query 364769 CTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATT 364828
| ||||| || || | |||||||| || | || || || | |||| || | || |
Sbjct 922532 CCACTGCTCAAATATTGGGAAACAATGAATCTTTTGAGCCATACACAACGAACATCTACT 922591
Query 364829 CACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATA 364867
|| | | ||||| ||||||||||||| |||| |||||
Sbjct 922592 CAAGAAGAGTTCTGTCCGGAGAATTTCAGGTA--TAATA 922628
>seq179
Length=2312354
Score = 86.0 bits (94), Expect = 2e-11
Identities = 121/170 (71%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 111636 ATTATGAGTGCATGGAACCCAAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTT 111695
||| | ||||||||||| || |||| |||||||| | || ||||| ||
Sbjct 182480 ATTGTTAGTGCATGGAATGTTGCTGATGTGGATAAAATGGCTTTGCCTCCATGCCACACA 182539
Query 111696 ATGTGCCAGTTTTATGTACACGACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCT 111755
|| | |||||||||||| |||||| | | ||||||||| | ||||| ||| |||
Sbjct 182540 ATTTTTCAGTTTTATGTATCCGACGGAAAATTATCATGCCAACTTTATCAACGAAGTGCC 182599
Query 111756 GATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTAC 111805
||| || ||| || || || |||||||||||| || ||||| |||||
Sbjct 182600 GATCTTTTTCTGGGAGTCCCTTTTAATATTGCATCATATGCACTCCTTAC 182649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1302939592987344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |