Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_007814.1 Length=37974 Score E Sequences producing significant alignments: (Bits) Value seq126 104 6e-18 >seq126 Length=3533043 Score = 104 bits (114), Expect = 6e-18 Identities = 204/295 (69%), Gaps = 14/295 (5%) Strand=Plus/Plus Query 32526 ATGAACTGTACCATATGGATGTTCTGGAGGTGCATATATAGCGTA-AATTTTAAGTGGTG 32584 ||| || ||||||| |||||||| | || ||||| || | || ||||||||| ||| Sbjct 1351323 ATGCACAGTACCATGCGGATGTTCAGCCGGAGCATAGATGGAATATAATTTTAAG-GGTT 1351381 Query 32585 TATTTCCTGTATTGATTACATTATGCCATTTTCCAGCAGGTATCATAATTGCATAGTCAT 32644 ||| |||||||| |||| |||||||||||| || ||||| | | |||||||| |||| Sbjct 1351382 TATCGCCTGTATTAATTATATTATGCCATTTACCCGCAGGAACAAATATTGCATAATCAT 1351441 Query 32645 CATAGACCATTTCTTGAA--AATCTAATTTA-TCTTTGTTATCACCCATTTGAACGAGTC 32701 | | | | ||||| || || ||| | || | ||||||||| || | Sbjct 1351442 CTT---CTACTTCTTCAATGAAATTAAGAGACTCCATAGAATCACCCATCATTACTTTTG 1351498 Query 32702 CTTGGCCCTCTTCAATACGTATGAATTGATCAGTTGTAGGGTGTACTTCTAAACCTATGT 32761 ||| || |||||||| | || ||| || ||| | |||| ||| ||||| | Sbjct 1351499 CTTTTCCTTCTTCAATCCTTAAGAACTGGTCAATATCCATATGTAGTTCCAAACCAA--- 1351555 Query 32762 CATCTCCA---ACATTAATACTCATTAAAGTTACTTGTAAGTTTTTTCCTGTCCA 32813 |||||||| || |||| ||||||| ||||| || | | ||||||||||| Sbjct 1351556 CATCTCCATTCACCGGAATAGTCATTAATGTTACCTGAAGACTATTTCCTGTCCA 1351610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121359460646144