Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_008363.1 Length=28538 Score E Sequences producing significant alignments: (Bits) Value seq4345 89.7 9e-14 >seq4345 Length=47284 Score = 89.7 bits (98), Expect = 9e-14 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 22131 CCAACTTTAACCCACGCTGTGCGACCGTCTGTGTGATAATTTAACCCTTGTTCATTTTCA 22190 || |||||||||||| | | ||||| ||||||||||| | || | | |||||||| Sbjct 36931 CCGACTTTAACCCACCCGGATTTGCCGTCAGTGTGATAATTCCATCCGTCTGCATTTTCA 36990 Query 22191 TAAACTTTGCTGTTAGCTTCAGGATATACTTTTTTAACTTCAGACCATGCAAATGCCCAG 22250 ||||| || |||| |||||||||| | |||||||| ||| ||| || ||||||| Sbjct 36991 TAAACAGTGTTGTTTGCTTCAGGATGAAGTTTTTTAAGTTCTCCCCACGCCCATGCCCAT 37050 Query 22251 CTAAGATAA 22259 ||||||| Sbjct 37051 GAAAGATAA 37059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 91173150264000