Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_008464.1 Length=60238 Score E Sequences producing significant alignments: (Bits) Value seq95 93.3 2e-14 >seq95 Length=1800565 Score = 93.3 bits (102), Expect = 2e-14 Identities = 208/312 (67%), Gaps = 9/312 (3%) Strand=Plus/Plus Query 32196 CCGGAGCAGTTCAGTGATGCGTTTGGTTTTCGTGGTGTGCAGTTTGGTAATTATGTGGAA 32255 || ||||| || | |||| | ||||||||| | || || |||||||| || ||||||||| Sbjct 88451 CCAGAGCAATTTAATGATACCTTTGGTTTTAGGGGCGTACAGTTTGGCAACTATGTGGAA 88510 Query 32256 GGTCCGCGTCGTCAGGCTGATTTGAACCGGGCTTATGACTCGCTGCATGACCTGGCTGAC 32315 || | || || |||||||| |||| | | |||||| | || | |||||| || || Sbjct 88511 GGAGCTAAACGACAAGCTGATTTAAACCAGACCTATGACGCACTACTTGACCTTGCCGAG 88570 Query 32316 GTGCTGAACGTGCCGACAAAAGCGCTTTCTCTGAACGGTCGTCTTGGGCTTGCTTTTGGT 32375 | | | | ||| ||||||| | || | || || ||||| | || ||||| Sbjct 88571 ATTTTAGAGCTACCGCCAAAAGCCTTATCATTAAATGGCGAACTTGGTTTAGCCTTTGGC 88630 Query 32376 GCCCGTGGTAAGGGT------AAGGCGGC---GGCACACTATGAGCCGGGTGAGGTGGCA 32426 || | ||||| ||| | ||||| || || |||||||| | |||| | Sbjct 88631 GCAAGGGGTAAAGGTGGTAAACAAGCGGCCTTAGCCCATTATGAGCCTGTACAGGTAGTT 88690 Query 32427 ATCAACCTGACAAAAGGTAACGGACCGGGGGCGCTGGCCCACGAATGGTTCCATTCACTG 32486 || ||||| || ||| | || | || | || || ||||| ||||| ||| | || Sbjct 88691 ATTAACCTAACCAAAAAAGAAGGGGCTGGTACACTCGCTCACGAGTGGTTTCATGCGCTA 88750 Query 32487 GATAATTATTTT 32498 ||||| || ||| Sbjct 88751 GATAACTACTTT 88762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 192583285820800