Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq783 82.4 6e-11 >seq783 Length=580412 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 |||||| |||||||| ||||| | ||||| ||||| ||||| ||||| || | Sbjct 390128 AATGCAGATTTTTGTAAAAACTCTTACCGGGAAAACTATTACTTTGGAAGTCGAGGCTTC 390187 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 ||| | | | | || ||| |||||| ||||| |||||| ||||| || || Sbjct 390188 GGATACGATCGAGAATGTCAAAGCCAAAATTCAGGACAAGGAAGGCATTCCCCCAGACCA 390247 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 ||| || | || | ||| ||||| || | || || |||| | | ||||| || Sbjct 390248 ACAGAGATTGATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGAACTCTTTCAGATTACAA 390307 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || |||||||||||||| ||| | ||| || | || || ||||| Sbjct 390308 CATTCAGAAAGAATCTACACTCCATCTTGTGCTGAGACTTCGTGGTGG 390355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422912177406400