Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_008562.1 Length=162109 Score E Sequences producing significant alignments: (Bits) Value seq3099 102 8e-17 >seq3099 Length=1637421 Score = 102 bits (112), Expect = 8e-17 Identities = 145/198 (73%), Gaps = 6/198 (3%) Strand=Plus/Minus Query 28352 ACACCATTCCCAGACGTTCCCGTGCATATCGTACAGTCCCCAAGCATTAGGTAGTTTTAA 28411 ||||||||| | || ||||||||||||||||||| ||||| | ||| || || || Sbjct 922049 ACACCATTCGAAAACATTCCCGTGCATATCGTACAAACCCCACGGATTTGGCAGCTTGGT 921990 Query 28412 TCCTAC-AGGATGGGTTGTTCCCTGA-GAATTATCAAAATACCAGGCGTAATCTCCTA-A 28468 ||| || | | ||| | || || ||||||||| ||||||| || ||||| || | Sbjct 921989 TCCAACTACGCCGGG--GCCGCCGGATGAATTATCAGAATACCACGCATAATCACCGAGC 921932 Query 28469 TTGACGATAATCATCTCCGAAATAATACTCAGTAGTAGTCCCCGCGCGGCAAGCATATTC 28528 ||| ||| ||| ||||| ||| | || ||| ||||| || || ||||| |||||||| Sbjct 921931 TTGGCGA-CATCGTCTCCAAAAGAGTAAGCAGCTGTAGTGCCGGCACGGCACGCATATTC 921873 Query 28529 CCATTCAGCCTCCGTTGG 28546 ||||| || || || || Sbjct 921872 CCATTGTGCTTCGGTAGG 921855 Score = 102 bits (112), Expect = 8e-17 Identities = 145/198 (73%), Gaps = 6/198 (3%) Strand=Plus/Minus Query 28352 ACACCATTCCCAGACGTTCCCGTGCATATCGTACAGTCCCCAAGCATTAGGTAGTTTTAA 28411 ||||||||| | || ||||||||||||||||||| ||||| | ||| || || || Sbjct 924271 ACACCATTCGAAAACATTCCCGTGCATATCGTACAAACCCCACGGATTTGGCAGCTTGGT 924212 Query 28412 TCCTAC-AGGATGGGTTGTTCCCTGA-GAATTATCAAAATACCAGGCGTAATCTCCTA-A 28468 ||| || | | ||| | || || ||||||||| ||||||| || ||||| || | Sbjct 924211 TCCAACTACGCCGGG--GCCGCCGGATGAATTATCAGAATACCACGCATAATCACCGAGC 924154 Query 28469 TTGACGATAATCATCTCCGAAATAATACTCAGTAGTAGTCCCCGCGCGGCAAGCATATTC 28528 ||| ||| ||| ||||| ||| | || ||| ||||| || || ||||| |||||||| Sbjct 924153 TTGGCGA-CATCGTCTCCAAAAGAGTAAGCAGCTGTAGTGCCGGCACGGCACGCATATTC 924095 Query 28529 CCATTCAGCCTCCGTTGG 28546 ||||| || || || || Sbjct 924094 CCATTGTGCTTCGGTAGG 924077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518460079414080