Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_008953.1
Length=3935
Score E
Sequences producing significant alignments: (Bits) Value
seq272 80.6 7e-12
seq1475 78.8 2e-11
>seq272
Length=1140823
Score = 80.6 bits (88), Expect = 7e-12
Identities = 106/147 (72%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 3334 CCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCG 3393
|| |||| || ||||| |||| | || ||||| || |||||||||||||||||
Sbjct 439855 CCTATGAGCCGGGTCTTCCCAAAGGTAACAAAGTGTACATTCCACAAATACGGTCCTTCA 439796
Query 3394 GGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAG 3453
||| | | | || | ||| ||||| ||| | || || ||| | || || ||||||
Sbjct 439795 GGCACAGTACAGAAGTTCGATGGACTATGCGTGCTTCCTTTGAATATCGTGAATGAGAAG 439736
Query 3454 ATCTACATTTTCCTCTGGTTCTGGTTC 3480
|||||| | ||||| ||||| ||||||
Sbjct 439735 ATCTACGTGTTCCTGTGGTTTTGGTTC 439709
>seq1475
Length=334732
Score = 78.8 bits (86), Expect = 2e-11
Identities = 63/76 (83%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 3419 TCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGT 3478
||||||| || || |||| | |||||||||||||||||||| ||||||||||||||||
Sbjct 73450 TCTGCATTCTTCCCCTGAACATCGTCAACGAGAAGATCTACATCTTCCTCTGGTTCTGGT 73509
Query 3479 TCTACGTGCTAGCCAT 3494
|| | | || |||||
Sbjct 73510 TCATCATCCTCGCCAT 73525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 12476615892000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |