Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq272 80.6 7e-12 seq1475 78.8 2e-11 >seq272 Length=1140823 Score = 80.6 bits (88), Expect = 7e-12 Identities = 106/147 (72%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 3334 CCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCG 3393 || |||| || ||||| |||| | || ||||| || ||||||||||||||||| Sbjct 439855 CCTATGAGCCGGGTCTTCCCAAAGGTAACAAAGTGTACATTCCACAAATACGGTCCTTCA 439796 Query 3394 GGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAG 3453 ||| | | | || | ||| ||||| ||| | || || ||| | || || |||||| Sbjct 439795 GGCACAGTACAGAAGTTCGATGGACTATGCGTGCTTCCTTTGAATATCGTGAATGAGAAG 439736 Query 3454 ATCTACATTTTCCTCTGGTTCTGGTTC 3480 |||||| | ||||| ||||| |||||| Sbjct 439735 ATCTACGTGTTCCTGTGGTTTTGGTTC 439709 >seq1475 Length=334732 Score = 78.8 bits (86), Expect = 2e-11 Identities = 63/76 (83%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 3419 TCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGT 3478 ||||||| || || |||| | |||||||||||||||||||| |||||||||||||||| Sbjct 73450 TCTGCATTCTTCCCCTGAACATCGTCAACGAGAAGATCTACATCTTCCTCTGGTTCTGGT 73509 Query 3479 TCTACGTGCTAGCCAT 3494 || | | || ||||| Sbjct 73510 TCATCATCCTCGCCAT 73525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12476615892000