Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq783 136 3e-27
seq2315 100 2e-16
seq1551 87.8 2e-12
>seq783
Length=580412
Score = 136 bits (150), Expect = 3e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| |||| ||| || | ||| | ||||||||||||||||||||||| |||
Sbjct 390130 ATTCCACCACGAAGTCGCAACACAAGATGAAGTGTAGATTCTTTTTGAATGTTGTAGTCG 390071
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||||||||| || || || || |||| | | ||||||||| ||
Sbjct 390070 GACAGGGTTCGTCCATCTTCAAGCTGCTTGCCGGCAAAGATCAATCTCTGTTGGTCTGGG 390011
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| || || |||||| ||| | | ||| | ||||| | || ||
Sbjct 390010 GGAATGCCTTCCTTATCCTGAATCTTGGCTTTGACATTTTCGATTGTGTCTGAGGCCTCA 389951
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | |||||||| || ||||| || ||||||||||||||
Sbjct 389950 ACTTCTAGAGTGATGGTTTTGCCAGTAAGAGTCTTCACAAAAATCTGCAT 389901
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| ||||||| || | ||| | ||||||||||| ||||||||||||||
Sbjct 390358 ATACCACCACGAAGTCTCAGCACAAGATGGAGTGTAGATTCTTTCTGAATGTTGTAATCT 390299
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| || || || || || || ||||| |||| | | ||||||||| ||
Sbjct 390298 GAAAGAGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAATCTCTGTTGGTCTGGG 390239
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| ||||| ||| || ||| | | || | || || | | |||
Sbjct 390238 GGAATGCCTTCCTTGTCCTGAATTTTGGCTTTGACATTCTCGATCGTATCCGAAGCCTCG 390179
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | ||||| ||||| |||||||||||||||||||||||
Sbjct 390178 ACTTCCAAAGTAATAGTTTTCCCGGTAAGAGTTTTTACAAAAATCTGCAT 390129
Score = 118 bits (130), Expect = 9e-22
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224
||||| | || || || | || ||||| || ||||||||||| || || || ||
Sbjct 391342 AGTCTAAGCACCAAGTGGAGAGTGGATTCCTTCTGAATGTTGTAGTCAGACAGGGTTCGT 391283
Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284
||||||||||||||||||||| |||| |||||||| || || ||||||||||| ||
Sbjct 391282 CCATCTTCAAGTTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGAATGCCCTCC 391223
Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344
|| || ||| || ||| | | ||| | ||||| | | || || |||| ||
Sbjct 391222 TTATCCTGAATTTTGGCTTTCACATTTTCGATTGTGTCTGAAGCCTCAACTTCCAAAGTG 391163
Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
| |||||||| |||| ||| || || |||||||||||
Sbjct 391162 ATGGTTTTGCCAGTCAAAGTCTTGACGAAAATCTGCAT 391125
Score = 91.5 bits (100), Expect = 1e-13
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 114193 CTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGA 114252
|||| ||||| ||||| || || ||| | ||| || || || || ||||| |||
Sbjct 390546 CTTTCTGAATATTGTAGTCTGACAGAGTCCTTCCATCCTCTAGCTGCTTGCCAGCAAAGA 390487
Query 114253 TGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTT 114312
| | | ||||||||| || ||||||||||| ||||| |||||| ||| | | ||
Sbjct 390486 TCAATCTCTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATCTTGGCTTTAACGTTTT 390427
Query 114313 CAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 114372
| | ||||| | | ||||| |||| || | ||||| || || || ||||| || |
Sbjct 390426 CGATCGTGTCTGAAGCCTCGACTTCCAAAGTGATGGTTTTACCAGTAAGGGTTTTCACGA 390367
Query 114373 AAATCTGCAT 114382
||||||||||
Sbjct 390366 AAATCTGCAT 390357
Score = 86.0 bits (94), Expect = 5e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287
||||| | |||||| ||||| |||| | | ||||||||| |||||||| || ||||||
Sbjct 387212 TCTTCCAATTGTTTGCCAGCAAAGATTAATCTCTGTTGGTCTGGAGGAATTCCCTCTTTG 387153
Query 114288 TCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACC 114347
|| |||||| || | | |||| ||| || | | ||| || || | ||| |
Sbjct 387152 TCTTGAATCTTAGCCTTCACGTTCTCAATGGTATCTGAAGCTTCAACTTCTAGGGTGATA 387093
Query 114348 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
||||| || ||||| || || || |||||||||||
Sbjct 387092 GTTTTCCCTGTCAGGGTCTTCACGAAAATCTGCAT 387058
>seq2315
Length=138946
Score = 100 bits (110), Expect = 2e-16
Identities = 136/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 114193 CTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGA 114252
||||||||||||| || || | || || |||||| || ||||| || ||| | |
Sbjct 26967 CTTTTTGAATGTTATAGTCTGAAAGTGTGCGTCCATCTTCCAGCTGTTTCCCTGCGAAAA 26908
Query 114253 TGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTT 114312
| | | ||| || || |||||||| || |||||||| ||| ||| ||||| | |
Sbjct 26907 TCAATCTCTGCTGATCAGGAGGAATCCCCTCTTTGTCTTGAATTTTTGCTTTTACATTCT 26848
Query 114313 CAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 114372
||| ||| || | | ||| || || | ||| | ||||| || || |||||||| ||||
Sbjct 26847 CAATGGTATCAGATGGTTCCACCTCAAGGGTTATGGTTTTACCAGTAAGAGTTTTCACAA 26788
Query 114373 AAATCTGCAT 114382
||||||||||
Sbjct 26787 AAATCTGCAT 26778
Score = 95.1 bits (104), Expect = 1e-14
Identities = 135/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 114193 CTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGA 114252
||||||| ||||||||||| || || || ||| || || || |||||||| |||
Sbjct 27320 CTTTTTGTATGTTGTAATCAGACAGTGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGA 27261
Query 114253 TGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTT 114312
| || | || || || |||||||| ||||| ||||| |||||| ||||| | ||
Sbjct 27260 TAAGTCTTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGTATCTTTGCTTTTACATTTT 27201
Query 114313 CAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 114372
||| || || | | ||| || |||| ||| | ||||| || |||| ||| || || |
Sbjct 27200 CAATTGTATCAGATGGTTCCACTTCCAAGGTGATAGTTTTTCCAGTCAAAGTCTTAACGA 27141
Query 114373 AAATCTGCAT 114382
| || |||||
Sbjct 27140 AGATTTGCAT 27131
Score = 89.7 bits (98), Expect = 4e-13
Identities = 133/189 (70%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254
|||||||| ||||| || || || || |||||| | ||||| || || | ||
Sbjct 29148 TTTTGAATATTGTAGTCCGACAGTGTGCGGCCATCTTCCAACTGTTTTCCTGCAAAAATT 29089
Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314
| ||||| ||||| || || || ||||||||||| ||||||| |||| | ||||
Sbjct 29088 AATCGCTGCTGGTCTGGTGGGATTCCTTCTTTGTCTTGAATCTTTGCCTTTACATTTTCA 29029
Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 114374
| ||| || | | ||| || |||| || | ||||| || || || || || |||||
Sbjct 29028 ATGGTATCAGATGGTTCTACCTCCAGTGTGATGGTTTTTCCTGTGAGGGTCTTCACAAAT 28969
Query 114375 ATCTGCATG 114383
|||||||||
Sbjct 28968 ATCTGCATG 28960
Score = 87.8 bits (96), Expect = 2e-12
Identities = 132/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254
|||||||| ||||| || || || ||| |||||| | ||||| || || | ||
Sbjct 27707 TTTTGAATATTGTAGTCCGACAGTGTGCGACCATCTTCCAACTGTTTGCCTGCAAAAATT 27648
Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314
| ||||| || || || || || ||||||||||| ||||||| |||| | ||||
Sbjct 27647 AATCGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGAATCTTTGCCTTTACATTTTCA 27588
Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 114374
| ||| || | | ||| || |||| || | ||||| || || || || || |||||
Sbjct 27587 ATGGTATCAGATGGTTCTACCTCCAGTGTGATGGTTTTTCCTGTGAGGGTCTTCACAAAT 27528
Query 114375 ATCTGCAT 114382
||||||||
Sbjct 27527 ATCTGCAT 27520
Score = 86.0 bits (94), Expect = 5e-12
Identities = 133/190 (70%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 114193 CTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGA 114252
||||||| || ||||| || || || ||| |||||| | ||||| || || | |
Sbjct 28211 CTTTTTGGATATTGTAGTCCGACAGTGTGCGACCATCTTCCAACTGTTTGCCTGCAAAAA 28152
Query 114253 TGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTT 114312
| | ||||| || || || || || ||||||||||| ||| ||| |||| | ||
Sbjct 28151 TTAATCGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGAATTTTTGCCTTTACATTTT 28092
Query 114313 CAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 114372
||| ||| || | | ||| || |||| || | |||||||| || || || || ||||
Sbjct 28091 CAATGGTATCAGATGGTTCTACCTCCAGTGTGATGGTTTTGCCTGTGAGGGTCTTCACAA 28032
Query 114373 AAATCTGCAT 114382
| ||||||||
Sbjct 28031 ATATCTGCAT 28022
>seq1551
Length=444118
Score = 87.8 bits (96), Expect = 2e-12
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284
|||| || ||||||||||||||| |||| |||||||| || || ||||| ||||| |
Sbjct 25182 GAATATTAAAGTTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGTATGCCCGCC 25241
Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344
|| || || || ||||| | ||| | ||||| | | || || |||| ||
Sbjct 25242 TTATCCTGGATTTTGGCTTTTACATTTTCGATTGTGTCTGAAGCCTCAACTTCCAAAGTG 25301
Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
| |||||||| |||| ||| || || |||||||||||
Sbjct 25302 ATGGTTTTGCCAGTCAAAGTCTTGACGAAAATCTGCAT 25339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420007455340704
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