Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_009018.1 Length=38528 Score E Sequences producing significant alignments: (Bits) Value seq2145 80.6 7e-11 >seq2145 Length=99266 Score = 80.6 bits (88), Expect = 7e-11 Identities = 124/177 (70%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 3977 TTTGTTGGAAAAGACGTTGCAGATGTTCTAGGATATACAAATTCAAATGATGCCTTAAAA 4036 || || || || ||||| || |||| | | || || || ||| || | || || | Sbjct 93601 TTCGTGGGTAAGGACGTGGCTGATGCTTTGGGTTACACCAATAGTAAAAAGGCATTGGGA 93660 Query 4037 AATCACGTCGATAGTGATGATAAGCAGATTCTCCAAAAGTCGCAAAACGCTACCTTAGAA 4096 ||||||| |||| || || |||||| | | | || ||| | || || |||||||||| Sbjct 93661 GATCACGTTGATACCGAGGACAAGCAGGTGGTTCTAAGGTCACGAATCGTTACCTTAGAA 93720 Query 4097 ATTCCAAATCGTGGCGTGACAATCATCACTGAATCAGGAGTTTACAATCTCATCTTC 4153 ||||| || ||||| |||| | |||| ||||| || | |||| ||||||| || Sbjct 93721 ATTCCCAACCGTGGTTTGACCTTTATCAACGAATCCGGCCTGTACAGTCTCATCCTC 93777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123131738724960