Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_009234.1 Length=35741 Score E Sequences producing significant alignments: (Bits) Value seq21956 107 4e-19 >seq21956 Length=1105 Score = 107 bits (118), Expect = 4e-19 Identities = 229/335 (68%), Gaps = 18/335 (5%) Strand=Plus/Plus Query 30600 TTCATCGACTGGCGTCAGCTCCCGACGCTGACCGATGTCGTGCAGGCGGCCGGCTTGATC 30659 |||||||||||||| |||||||| | ||||||| | | |||| |||||||| ||| Sbjct 533 TTCATCGACTGGCGGCAGCTCCCCAGCATGACCGACGCCCTGCAATGGGCCGGCTGGATT 592 Query 30660 CTGCGCGGCGTCGCGGTATGGGACAAGACGCCCGGCCGCACGCGGCCGCGGCGCGGCGGC 30719 ||| ||||| || ||||||||||| | ||||| | | | |||| ||||| Sbjct 593 TGGCGGGGCGTGCTGGCCTGGGACAAGACCAACTGCCGCCCCCAG-CGCG----GGCGGT 647 Query 30720 TTCGCGCAGCAGGCGGAATTCGTCGTATGGGCGAGCCGCGGCGCGATGC---GTGACTGC 30776 | ||| ||||||||||| ||||| || |||| ||| |||| |||| ||| || Sbjct 648 TCCGC-CAGCAGGCGGAGTTCGTGGTGTGGGGCAGCAACGGCCACATGCCCGCCGACCGC 706 Query 30777 GAGGTG--TAT-CTGCCCGGCGTGTTCCCGTGCCGCTTGC---CGTTGCCGAAGC---AA 30827 ||| | || ||||| || ||||||| | | ||| || | || |||| | Sbjct 707 AAGGCGCCGATCCTGCCGGGTGTGTTCCGGCAGTCCATGCCCTCGCTCCCCAAGCGCAGA 766 Query 30828 CACGTGACCGAGAAGCCGCTCGACATAGCGCGCGAGGTCGTGCGGCTCGTGCCGGCCGGC 30887 ||| ||||||||||||||| || | ||| ||| ||||| | ||||| | | ||| Sbjct 767 CACCAGACCGAGAAGCCGCTGGAGGTGATGCGGGAGATCGTGAAGATCGTGGAGCCGGGC 826 Query 30888 GGCGTCGTGTGCGATCTGTTCGCCGGTTCCGGCAC 30922 ||| || | || | |||||||| | ||||| Sbjct 827 GGCATCATCCTGGACCCCTTCGCCGGGGCGGGCAC 861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114215964346512