Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq2720 105 5e-18
seq877 105 5e-18
>seq2720
Length=46158
Score = 105 bits (116), Expect = 5e-18
Identities = 87/102 (85%), Gaps = 3/102 (3%)
Strand=Plus/Plus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391
|||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||
Sbjct 21829 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTCTTTCATCTAAGGAACC 21888
Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAAGTAT 114433
| ||||||| || ||||||||||| ||| || ||| |||||
Sbjct 21889 ATAACTGATTTAATGAGCCATTCGCGGTTTC-ACTTTAGTAT 21929
Score = 105 bits (116), Expect = 5e-18
Identities = 87/102 (85%), Gaps = 3/102 (3%)
Strand=Plus/Plus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588
|||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||
Sbjct 21829 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTCTTTCATCTAAGGAACC 21888
Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAAGTAT 115630
| ||||||| || ||||||||||| ||| || ||| |||||
Sbjct 21889 ATAACTGATTTAATGAGCCATTCGCGGTTTC-ACTTTAGTAT 21929
>seq877
Length=573560
Score = 105 bits (116), Expect = 5e-18
Identities = 87/102 (85%), Gaps = 3/102 (3%)
Strand=Plus/Plus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391
|||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||
Sbjct 352774 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTCTTTCATCTAAGGAACC 352833
Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAAGTAT 114433
| ||||||| || ||||||||||| ||| || ||| |||||
Sbjct 352834 ATAACTGATTTAATGAGCCATTCGCGGTTTC-ACTTTAGTAT 352874
Score = 105 bits (116), Expect = 5e-18
Identities = 87/102 (85%), Gaps = 3/102 (3%)
Strand=Plus/Plus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588
|||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||
Sbjct 352774 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTCTTTCATCTAAGGAACC 352833
Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAAGTAT 115630
| ||||||| || ||||||||||| ||| || ||| |||||
Sbjct 352834 ATAACTGATTTAATGAGCCATTCGCGGTTTC-ACTTTAGTAT 352874
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396942426603184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |