Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_009760.1 Length=218948 Score E Sequences producing significant alignments: (Bits) Value seq373 102 1e-16 seq3213 95.1 2e-14 >seq373 Length=1274844 Score = 102 bits (112), Expect = 1e-16 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 157433 GCACGAGTGATACCTACATACGCTAGGCGACGTTCTTCTTCTAATTGAACTGTATCAGAT 157492 ||||| || || |||||||| |||| |||||||||||||||| || | |||| | Sbjct 369745 GCACGGGTAATTCCTACATAGGCTAAACGACGTTCTTCTTCTAGGCGATCAATATCTTCT 369804 Query 157493 AGACTACGTGAATGCGGGAATAATCCCTCTTCCATACCAATCATAAATACGACTGGATAC 157552 | | | ||| || ||||||| ||| ||||||||||| | | |||||| | ||| || Sbjct 369805 ATATTGCGTTGGTGGGGGAATAGTCCTTCTTCCATACCCGTTAAAAATACTAAAGGAAAC 369864 Query 157553 TCAAGTCCTTTCGAAGTATGAAGCGTCATTAATTGTACTTTGTCTT 157598 || || ||||| | | |||| | ||||||| |||||| ||||| Sbjct 369865 TCTAGCCCTTTAGCATTATGTAAGGTCATTAGTTGTACGCAGTCTT 369910 >seq3213 Length=2170589 Score = 95.1 bits (104), Expect = 2e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 164082 TTTACTGCTGTTTTCAACTCTTTACCAGCTTTGAATGCCGGTACTTTTGTTGCAGCAATT 164141 || || || ||||| || | |||||||||| ||| || || ||| || |||||| ||| Sbjct 1757871 TTAACAGCAGTTTTGAATTTTTTACCAGCTGAGAAAGCAGGAACTGTTCTTGCAGGTATT 1757930 Query 164142 TCAATTTCTTCACCAGTTTGTGGGTTACGTCCCTTACGAGCCGCACGGTCACGAGTTTCG 164201 | || ||||| ||||||||||||||| | || | | ||| || | | || | |||| Sbjct 1757931 TTAAGTTCTTTACCAGTTTGTGGGTTTCTACCGATTCTAGCAGCTCTTTTGCGTGCTTCG 1757990 Query 164202 AATGTACCAAAGCCGATTAACTGTACTTTGTTACCTT 164238 || |||||||| || | ||| ||||| ||||||| Sbjct 1757991 AAAGTACCAAAACCAACTAAAGTAACTTTTTTACCTT 1758027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700288513314560