Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_009819.1
Length=40539
Score E
Sequences producing significant alignments: (Bits) Value
seq21035 91.5 4e-14
seq1604 82.4 2e-11
>seq21035
Length=35860
Score = 91.5 bits (100), Expect = 4e-14
Identities = 98/130 (75%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 8607 CTGACTTCTCAGCGATTGAGGCTAGGGTGATTGCATGGTTTGCTGGAGAGCAGTGGAGGC 8666
|||||| ||| || || || || | ||||| || ||| | || || ||||| ||| |||
Sbjct 30397 CTGACTACTCGGCCATAGAAGCACGTGTGATAGCCTGGCTGGCCGGTGAGCAATGGCGGC 30338
Query 8667 TTGACGTGTTTTCGACGCACGGGAAAATCTACGAGGCGTCTGCCAGTCAGATGTTCGGAA 8726
| ||||| || |||| || || || || || |||||||| ||||| |||||||||||
Sbjct 30337 TGGACGTTTTCGCGACCCATGGAAAGATTTATGAGGCGTCGGCCAGCCAGATGTTCGGCG 30278
Query 8727 TTCCAATTGA 8736
| || |||||
Sbjct 30277 TGCCCATTGA 30268
>seq1604
Length=351056
Score = 82.4 bits (90), Expect = 2e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 7820 CAGGAAAAAGATACCTCGGGTAAAAACTTAATCAGATACTTTTCCCTGCCTTGCAAACCA 7879
||| ||||||| || ||||||| | | || | |||||||||||||||||||| ||
Sbjct 247366 CAGCAAAAAGACGCCCGGGGTAAATCCCTTATTACTTACTTTTCCCTGCCTTGCAAGCCT 247307
Query 7880 AGTAAAACTAACGGTGGGAGAACTAGAAATTTACCAGAACACGCCCCCGAAAAGTGGCAA 7939
| ||||| ||| | || |||||| || || ||| ||| ||||||||| ||| ||
Sbjct 247306 ACTAAAAAGAACCGAGGCCGAACTATTAACCGGCCTGAAGACGACCCCGAAAAATGGGAA 247247
Query 7940 ATGTTTATTGACTAC 7954
|||||| || |||
Sbjct 247246 TTGTTTAAAGAATAC 247232
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 129565044169904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |