Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1599 89.7 6e-13 >seq1599 Length=3738065 Score = 89.7 bits (98), Expect = 6e-13 Identities = 191/281 (68%), Gaps = 6/281 (2%) Strand=Plus/Plus Query 10874 TCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCG 10933 || || || ||||| || |||| ||||||||| | |||||||| ||||||||||| | Sbjct 3256147 TCGAAACCGTCCATTTCTGTCAGGAGTTGATTCAGCGTTTGTTCCCGTTCATCATTACC- 3256205 Query 10934 GGCATACCA--CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGA 10991 || | ||| | | ||||| |||||| | || || || ||||| ||||||| || Sbjct 3256206 -GCCTCCCAGTGCGTTATCGCGTTTCTTACCAATGGTATCTATCTCATCTATGAAAATGA 3256264 Query 10992 TACACGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACAC 11051 |||| || || |||| || | ||||| ||| |||||| | || || | | Sbjct 3256265 TACAAGGGGCTTTCTCACTTGCCTGCTTAAAGAGATCGCGGACTTTGGCTGCTCCCATGC 3256324 Query 11052 CCACAAACATTTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCA 11110 | |||||||| | ||||| | || | | | || | | ||| || || || | ||| Sbjct 3256325 CGACAAACATCTGTACAAATTCGGAACCTG-ATATGGAAAAGAACGGTACTTTTGCCTCA 3256383 Query 11111 CCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCAGG 11151 || || | || ||||||| |||||||| || || || || Sbjct 3256384 CCTGCCACAGCGCGGGCGATCAGGGTCTTTCCTGTTCCCGG 3256424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597168480119360