Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_010811.2 Length=231255 Score E Sequences producing significant alignments: (Bits) Value seq179 95.1 2e-14 seq3213 89.7 8e-13 seq3436 87.8 3e-12 seq2694 87.8 3e-12 seq1094 87.8 3e-12 seq875 87.8 3e-12 seq5589 86.0 9e-12 seq2787 86.0 9e-12 seq1702 86.0 9e-12 >seq179 Length=2312354 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 186531 GTCCGAGTGAGAGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCTAACCAG 186590 ||| | ||| ||||||||||||| |||||||||| ||||||| |||||||||||||| | Sbjct 479353 GTCGGGGTGGCAGGATTCGAACCTGCGACCCCCTGCTCCCAAAGCAGGTGCGCTAACCGG 479412 Query 186591 ACTGCGCTACAC 186602 |||||||||||| Sbjct 479413 ACTGCGCTACAC 479424 >seq3213 Length=2170589 Score = 89.7 bits (98), Expect = 8e-13 Identities = 66/76 (87%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 186301 TGGAGCGGGCGACGAGACTCGAACTCGCGACATCTTGCTTGGAAGGCAAGAACTCTACCA 186360 |||||||| |||||||||||||||||| ||| ||||||||||||||||| |||||||| Sbjct 1639040 TGGAGCGGAAGACGAGACTCGAACTCGCAACAGCTTGCTTGGAAGGCAAGTACTCTACC- 1639098 Query 186361 ACTGAGCTACGCCCGC 186376 | |||| ||| |||| Sbjct 1639099 ATTGAGTTACTTCCGC 1639114 >seq3436 Length=2346199 Score = 87.8 bits (96), Expect = 3e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 186542 AGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCTAACCAGACTGCGCTACA 186601 ||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||||||| Sbjct 2131331 AGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAACCGGACTGCGCTACA 2131390 Query 186602 C 186602 | Sbjct 2131391 C 2131391 >seq2694 Length=83261 Score = 87.8 bits (96), Expect = 3e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 186542 AGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCTAACCAGACTGCGCTACA 186601 ||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||||||| Sbjct 48465 AGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAACCGGACTGCGCTACA 48406 Query 186602 C 186602 | Sbjct 48405 C 48405 >seq1094 Length=2708314 Score = 87.8 bits (96), Expect = 3e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 186542 AGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCTAACCAGACTGCGCTACA 186601 ||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||||||| Sbjct 981888 AGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAACCGGACTGCGCTACA 981947 Query 186602 C 186602 | Sbjct 981948 C 981948 Score = 87.8 bits (96), Expect = 3e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 186542 AGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCTAACCAGACTGCGCTACA 186601 ||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||||||| Sbjct 981994 AGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAACCGGACTGCGCTACA 982053 Query 186602 C 186602 | Sbjct 982054 C 982054 >seq875 Length=1099013 Score = 87.8 bits (96), Expect = 3e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 186542 AGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCTAACCAGACTGCGCTACA 186601 ||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||||||| Sbjct 1090771 AGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAACCGGACTGCGCTACA 1090830 Query 186602 C 186602 | Sbjct 1090831 C 1090831 >seq5589 Length=13581 Score = 86.0 bits (94), Expect = 9e-12 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 186542 AGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCTAACCAGACTGCGCTACA 186601 ||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||||||| Sbjct 7320 AGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAACCGGACTGCGCTACA 7379 >seq2787 Length=1710943 Score = 86.0 bits (94), Expect = 9e-12 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 186542 AGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCTAACCAGACTGCGCTACA 186601 ||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||||||| Sbjct 1180855 AGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAACCGGACTGCGCTACA 1180914 >seq1702 Length=707479 Score = 86.0 bits (94), Expect = 9e-12 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 186542 AGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCTAACCAGACTGCGCTACA 186601 ||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||||||| Sbjct 411525 AGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAACCGGACTGCGCTACA 411584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 739658708708800