Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq1070 116 2e-21 >seq1070 Length=478823 Score = 116 bits (128), Expect = 2e-21 Identities = 455/705 (65%), Gaps = 29/705 (4%) Strand=Plus/Plus Query 65913 ATTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGC 65972 |||||| | || ||||| || |||| || || || | || || ||||||| ||| Sbjct 111699 ATTCCCTCAGGTTCGATCACTTTGGATATAGCGCTGGGTGTAGGCGGATATCCGAAGGGT 111758 Query 65973 CGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCG 66032 |||| || || || ||||| || |||||||| || || | ||| || ||| || || Sbjct 111759 AGGGTTGTCGAAATATACGGCCCCGAGTCTTCGGGAAAAACGACGCTGGCCCTGCATGCA 111818 Query 66033 GTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTC 66092 | || | || ||||| || || || | ||| || | ||| || || ||||| || || Sbjct 111819 ATCGCGGAGGCGCAGAAAGCAGGAGGTATCGCTGCATTCATAGATGCGGAACACGCTTTC 111878 Query 66093 GACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCA 66152 || | || ||| | || || || ||||||||||| || | | | ||| ||| Sbjct 111879 GATAGTTTTTATGCCCAGAAACTGGGCGTCGATGTCGACAACCTGCTTATAGCGCAACCA 111938 Query 66153 GACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCT--GGCGAGGTTT 66210 |||| || || ||||| ||||| || | || || ||| |||| ||||| | Sbjct 111939 GACAACGGAGAACAGGCTCTGGAAATAGCGGATAACCTGATCAGGTCTTCGGCGA----T 111994 Query 66211 CCATCATCGTTGTG---GACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGG 66267 || || || ||| ||||| || || || || ||| ||| || |||| || | Sbjct 111995 AGAT-ATAGTGGTGATCGACTCGGTAGCCGCACTTACGCCCAAGGCCGAAATCGAGGGCG 112053 Query 66268 ACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGC 66327 | || || || ||| | | ||||| || || | || ||||| ||||| |||| || Sbjct 112054 ATATGGGAGAGTCGAAGATGGGCCTTCAGGCGAGACTCATGTCGCAGGCATTGCGTAAAT 112113 Query 66328 TGACCGGCACGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGA 66387 | || || | || | ||||| ||| | | | | | |||||| ||||||| | Sbjct 112114 TAACGGGGAGCATCAGTAAGACCAAAACGGTTTGCATTTTCATCAATCAGTTGCGCGACA 112173 Query 66388 AGATCGGCAACGTGGGCTACGG---CCCGAATGAGACCACCACCGGTGGTAAGGCTCTGC 66444 ||||||| || | ||||| |||| || || || ||||||||||| || || Sbjct 112174 AGATCGG---AGTTGTTTACGGTAACCCG---GAAACAACAACCGGTGGTAATGCATTGA 112227 Query 66445 GCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAG----AAGGAAGGC 66500 || ||||| || || || ||| |||| | | || |||| ||||| ||| Sbjct 112228 AGTTTTACGCAAGTGTACGCATAGATATCCG-AAAAGCG---TCGAGTATCAAGGACGGC 112283 Query 66501 GATGAGGCTG-TCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCC 66559 || | | | |||| | || || || || || || |||||||| |||| || || Sbjct 112284 GA-CACACAGCTCGGGACACGGGCGAAGGTCAAAGTGGTAAAGAACAAAGTGGCCCCGCC 112342 Query 66560 GCACCGCCAGGCTGAGTTTTCCATCGTCTACGGCGAGGGCATTTC 66604 ||| | || ||||| ||| | ||||| ||||| ||||| Sbjct 112343 TTTCCGTAAAGCCGAGTTCGACATAATGTACGGTGAGGGTATTTC 112387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242397136962464