Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_011269.1
Length=154017
Score E
Sequences producing significant alignments: (Bits) Value
seq1659 86.0 6e-12
seq2787 84.2 2e-11
seq1885 84.2 2e-11
seq7088 82.4 8e-11
>seq1659
Length=254437
Score = 86.0 bits (94), Expect = 6e-12
Identities = 115/155 (74%), Gaps = 5/155 (3%)
Strand=Plus/Minus
Query 112983 TGCCTGTGCGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGC 113042
|| ||||| || ||||| || || || |||| || ||| | || | |||| | | ||
Sbjct 98743 TGGCTGTG-GGACCGGGACGCGGTTCGGCCGCCGGGTCGGTCGTGGCATACGCCCTCGGG 98685
Query 113043 ATCACCTCGATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGAC 113102
|| || |||||||||||||| ||||||||| | |||||||| ||| |||| || |||
Sbjct 98684 ATAACTAATATCGACCCGATCAAATACGACCTGCTTTTCGAGCGTTTCCTCAATCCCGAC 98625
Query 113103 CG--CCCCGACTTCCCCGACATCGACGTCGACTTC 113135
|| | || ||| ||||| |||||| |||| |||
Sbjct 98624 CGTATCTCG-CTT-CCCGATATCGACATCGATTTC 98592
>seq2787
Length=1710943
Score = 84.2 bits (92), Expect = 2e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 95448 ATGCGAAGGTAGCTCAGCTGGCAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGATCGC 95507
||||||| ||||||||| ||| ||||| | ||||||||||||| | ||||||||| |||
Sbjct 516232 ATGCGAAAGTAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGGGTTCGA 516173
Query 95508 AACCCGTTCTTCGCTC 95523
| ||||| |||||||
Sbjct 516172 ATCCCGTCTTTCGCTC 516157
Score = 82.4 bits (90), Expect = 8e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 95449 TGCGAAGGTAGCTCAGCTGGCAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGATCGCA 95508
|||||| ||||||||| ||| ||||| | ||||||||||||| | ||||||||| ||| |
Sbjct 253217 TGCGAAAGTAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGGGTTCGAA 253158
Query 95509 ACCCGTTCTTCGCTC 95523
||||| |||||||
Sbjct 253157 TCCCGTCTTTCGCTC 253143
>seq1885
Length=148911
Score = 84.2 bits (92), Expect = 2e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 95448 ATGCGAAGGTAGCTCAGCTGGCAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGATCGC 95507
||||||| ||||||||| ||| ||||| | ||||||||||||| | ||||||||| |||
Sbjct 88486 ATGCGAAAGTAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGGGTTCGA 88545
Query 95508 AACCCGTTCTTCGCTC 95523
| ||||| |||||||
Sbjct 88546 ATCCCGTCTTTCGCTC 88561
>seq7088
Length=425276
Score = 82.4 bits (90), Expect = 8e-11
Identities = 65/77 (84%), Gaps = 1/77 (1%)
Strand=Plus/Plus
Query 92359 GTAGCGGTGTAGAGCAGCTAGGTAGCTCGCCGGGCTCATAACCCGGAGGACGCGTGTTCG 92418
|| |||| ||||||||||| ||||||||| ||||||||||||||||||| ||| |||||
Sbjct 185437 GTCGCGGGGTAGAGCAGCT-GGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCG 185495
Query 92419 AATCACGCCACCGCCAC 92435
|||| | | |||| ||
Sbjct 185496 AATCCTGTCCCCGCAAC 185512
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 492573704088640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |