Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_011271.1 Length=155372 Score E Sequences producing significant alignments: (Bits) Value seq1659 86.0 6e-12 seq7088 82.4 8e-11 >seq1659 Length=254437 Score = 86.0 bits (94), Expect = 6e-12 Identities = 115/155 (74%), Gaps = 5/155 (3%) Strand=Plus/Minus Query 115014 TGCCTGTGCGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGC 115073 || ||||| || ||||| || || || |||| || ||| | || | |||| | | || Sbjct 98743 TGGCTGTG-GGACCGGGACGCGGTTCGGCCGCCGGGTCGGTCGTGGCATACGCCCTCGGG 98685 Query 115074 ATCACCTCGATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGAC 115133 || || |||||||||||||| ||||||||| | |||||||| ||| |||| || ||| Sbjct 98684 ATAACTAATATCGACCCGATCAAATACGACCTGCTTTTCGAGCGTTTCCTCAATCCCGAC 98625 Query 115134 CG--CCCCGACTTCCCCGACATCGACGTCGACTTC 115166 || | || ||| ||||| |||||| |||| ||| Sbjct 98624 CGTATCTCG-CTT-CCCGATATCGACATCGATTTC 98592 >seq7088 Length=425276 Score = 82.4 bits (90), Expect = 8e-11 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 93798 GTAGCGGTGTAGAGCAGCTAGGTAGCTCGCCGGGCTCATAACCCGGAGGACGCGTGTTCG 93857 || |||| ||||||||||| ||||||||| ||||||||||||||||||| ||| ||||| Sbjct 185437 GTCGCGGGGTAGAGCAGCT-GGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCG 185495 Query 93858 AATCACGCCACCGCCAC 93874 |||| | | |||| || Sbjct 185496 AATCCTGTCCCCGCAAC 185512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496908360362240