Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_012663.1 Length=60074 Score E Sequences producing significant alignments: (Bits) Value seq1599 89.7 2e-13 >seq1599 Length=3738065 Score = 89.7 bits (98), Expect = 2e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 18288 GATATGTTTGTAGCAGGAGTTGGAACTGGTGGCACTATTACTGGAGCAGGTCATTCACTC 18347 ||||| ||||| || ||||||||||| || || || || | ||||| ||| | Sbjct 1897378 GATATCTTTGTTGCTGGAGTTGGAACAGGCGGTACAATCAGTGGAGTAGGGGCCGGCTTG 1897437 Query 18348 AAAGAAGAATTTCCTAGCATTAAAATTGTTGGAGTTGAATCAGCAGAATCACCAGTACTT 18407 ||| | | ||| | ||||||||||| |||||||| || |||||| |||| ||| Sbjct 1897438 AAAACACACAATCCGAAGATTAAAATTGTGGGAGTTGAGCCAAAAGAATCTGCAGTGCTT 1897497 Query 18408 AGTGGAGGAGAACCTGGACCACATAAGATTCAAGGTATTTCAGCAGGTTTTATTCCACAA 18467 || ||| | || |||||||||||||| || |||||| ||| || ||| | || || Sbjct 1897498 TCGGGTGGAAAGCCCGGACCACATAAGATACAGGGTATTGGAGCCGGATTTGTACCTAAA 1897557 Query 18468 AT 18469 || Sbjct 1897558 AT 1897559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 192058640324544