Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_012743.2 Length=62715 Score E Sequences producing significant alignments: (Bits) Value seq2697 96.9 1e-15 >seq2697 Length=66574 Score = 96.9 bits (106), Expect = 1e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 52248 CACGACTACTTCTTCGCCAAGACCATCGACCGCGTGAAGCCGGGCGGCATGCTCGTGTTC 52307 |||||||| ||||||||||| | | ||| ||| ||| |||||| | | | ||| Sbjct 65898 CACGACTATTTCTTCGCCAAAGCGCTGGACAAGGTGCGGCCCGGCGGCGTCATTGCTTTC 65839 Query 52308 GTCACCAGCAAGGGCACGATGGACAAGGCGAGCGACCGCGCACGCCGCTACCTCGCCGAC 52367 |||||| ||| ||| ||||||||| | |||| || ||||| || || | || Sbjct 65838 GTCACCTCCAAATTCACCATGGACAAGCAGGACGACACCGTGCGCCGGTATATCTCTGAG 65779 Query 52368 CGCGCGAACCTGATCGGCGCCATGCGGCTGCCGCAGACCGCGTTCAAGGACAACGCCGGC 52427 ||||| | || || ||||| | || ||||| | || || |||||| | |||||||| Sbjct 65778 CGCGCCGAGCTCATGGGCGCGCTACGCCTGCCCAACACAGCCTTCAAGAAAAACGCCGGT 65719 Query 52428 ACGGAAGTCGTGACCGACGTGCTGTTCCTCCAGAAGCG 52465 || || ||| ||||| | |||||||| | ||||| Sbjct 65718 ACCGAGGTCACCACCGATATCCTGTTCCTGAAAAAGCG 65681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200502599327712