Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq1690 109 7e-19 seq3213 98.7 1e-15 seq373 95.1 2e-14 seq1604 91.5 2e-13 seq1752 89.7 6e-13 seq3496 86.0 8e-12 seq1991 86.0 8e-12 seq5996 84.2 3e-11 seq3885 84.2 3e-11 seq3709 84.2 3e-11 seq1702 84.2 3e-11 seq126 84.2 3e-11 seq3436 82.4 9e-11 >seq1690 Length=1574822 Score = 109 bits (120), Expect = 7e-19 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 176306 TGGAGAATAGGAGACTCGAACTCCTGACAGCCTGCTTGCAAAGCAGGTGCTCTACCAACT 176365 |||||| ||||||| |||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 1439784 TGGAGATTAGGAGAGTCGAACTCCTGACATCCTGCTTGCAAGGCAGGTGCTCTACCAACT 1439843 Query 176366 GAGCTAATTCCCC 176378 ||||||| ||||| Sbjct 1439844 GAGCTAAATCCCC 1439856 >seq3213 Length=2170589 Score = 98.7 bits (108), Expect = 1e-15 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 176306 TGGAGAATAGGAGACTCGAACTCCTGACAGCCTGCTTGCAAAGCAGGTGCTCTACCAACT 176365 ||||| |||||||| |||||||||| || ||||| |||||||||||||||||||||| | Sbjct 229518 TGGAGGATAGGAGAATCGAACTCCTCACCCCCTGCGTGCAAAGCAGGTGCTCTACCAAAT 229459 Query 176366 GAGCTAATTCCCCTGGA 176382 |||||||| |||| ||| Sbjct 229458 GAGCTAATCCCCCAGGA 229442 >seq373 Length=1274844 Score = 95.1 bits (104), Expect = 2e-14 Identities = 114/151 (75%), Gaps = 7/151 (5%) Strand=Plus/Plus Query 176306 TGGAGAATAGGAGACTCGAACTCCTGACAGCCTGCTTGCAAAGCAGGTGCTCTACCAACT 176365 ||||| ||||| ||||||||||||| ||||| ||||| ||||| ||||| ||| || Sbjct 21058 TGGAGCCAAGGAGGATCGAACTCCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCT 21117 Query 176366 GAGCTAATTCCCC---TGGAGCCACAAGTCGGACTTGAACCGACGA-CCTACGGTTTACA 176421 |||||| |||| ||| | | || ||||||||||| |||| || ||| || | Sbjct 21118 GAGCTATGGCCCCATTTGGTGGGTCTGGTAGGACTTGAACCTACGACCCCACGCTTATC- 21176 Query 176422 AAACCGT-TGCTCTATCCAGCTGAGCTATAG 176451 || ||| ||||||| |||||||||||| || Sbjct 21177 -AAGCGTGTGCTCTAACCAGCTGAGCTACAG 21206 >seq1604 Length=351056 Score = 91.5 bits (100), Expect = 2e-13 Identities = 56/60 (93%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 32022 AGGATTCGAACCTACGACCGACTGCTTAGAAGGCAGTTGCTCTATCCAGCTGAGCTATTG 32081 ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| || Sbjct 255348 AGGATTCGAACCTGAGACCTACTGCTTAGAAGGCAGTTGCTCTATCCAGCTGAGCTACTG 255407 >seq1752 Length=186427 Score = 89.7 bits (98), Expect = 6e-13 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 32022 AGGATTCGAACCTACGACCGACTGCTTAGAAGGCAGTTGCTCTATCCAGCTGAGCTA 32078 ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| Sbjct 14640 AGGATTCGAACCTGAGACCTACTGCTTAGAAGGCAGTTGCTCTATCCAGCTGAGCTA 14696 >seq3496 Length=15201 Score = 86.0 bits (94), Expect = 8e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 176306 TGGAGAATAGGAGACTCGAACTCCTGACAGCCTGCTTGCAAAGCAGGTGCTCTA-CCAAC 176364 ||||||||| || |||||| |||| |||||||||||||||||||||||| ||||| Sbjct 7625 TGGAGAATATCGGAGTCGAACCGATGACCCCCTGCTTGCAAAGCAGGTGCTCTAGCCAAC 7684 Query 176365 TGAGCTAATTCCCC 176378 |||||||||||||| Sbjct 7685 TGAGCTAATTCCCC 7698 >seq1991 Length=147557 Score = 86.0 bits (94), Expect = 8e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 176306 TGGAGAATAGGAGACTCGAACTCCTGACAGCCTGCTTGCAAAGCAGGTGCTCTA-CCAAC 176364 ||||||||| || |||||| |||| |||||||||||||||||||||||| ||||| Sbjct 145114 TGGAGAATATCGGAGTCGAACCGATGACCCCCTGCTTGCAAAGCAGGTGCTCTAGCCAAC 145173 Query 176365 TGAGCTAATTCCCC 176378 |||||||||||||| Sbjct 145174 TGAGCTAATTCCCC 145187 >seq5996 Length=10664 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/75 (85%), Gaps = 2/75 (3%) Strand=Plus/Minus Query 176306 TGGAGAATAGGAGACTCGAACTCCTGACAGCCTGCTTGCAAAGCAGGTGCTCTA--CCAA 176363 ||||||||| | ||||||||| | |||| ||||| ||||| |||||||||||| |||| Sbjct 3339 TGGAGAATAAGGGACTCGAACCCTTGACCCCCTGCGTGCAAGGCAGGTGCTCTAAGCCAA 3280 Query 176364 CTGAGCTAATTCCCC 176378 |||||||||| |||| Sbjct 3279 CTGAGCTAATCCCCC 3265 >seq3885 Length=21154 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/75 (85%), Gaps = 2/75 (3%) Strand=Plus/Minus Query 176306 TGGAGAATAGGAGACTCGAACTCCTGACAGCCTGCTTGCAAAGCAGGTGCTCTA--CCAA 176363 ||||||||| | ||||||||| | |||| ||||| ||||| |||||||||||| |||| Sbjct 4018 TGGAGAATAAGGGACTCGAACCCTTGACCCCCTGCGTGCAAGGCAGGTGCTCTAAGCCAA 3959 Query 176364 CTGAGCTAATTCCCC 176378 |||||||||| |||| Sbjct 3958 CTGAGCTAATCCCCC 3944 >seq3709 Length=23830 Score = 84.2 bits (92), Expect = 3e-11 Identities = 72/88 (82%), Gaps = 1/88 (1%) Strand=Plus/Minus Query 31291 GCGGAGAGGGTGGGATTCGAACCCACGGAGGCTTTC-ACCTCGCTAGTTTTCAAGACTAG 31349 |||||||||||||||||||||||||||| ||||| || || ||||||||||| || Sbjct 4328 GCGGAGAGGGTGGGATTCGAACCCACGGCCCCTTTCGGAGTCACTGGTTTTCAAGACCAG 4269 Query 31350 AGCCTTCAACCACTCGACCACCTCTCCA 31377 |||| |||| |||| |||||||||| Sbjct 4268 CTCCTTAAACCGCTCGGACACCTCTCCA 4241 >seq1702 Length=707479 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 32023 GGATTCGAACCTACGACCGACTGCTTAGAAGGCAGTTGCTCTATCCAGCTGAGCTA 32078 ||||||||||| |||||| || ||||||||||| |||||||||||||||||||||| Sbjct 285392 GGATTCGAACCCACGACCCACAGCTTAGAAGGCTGTTGCTCTATCCAGCTGAGCTA 285447 >seq126 Length=3533043 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 32023 GGATTCGAACCTACGACCGACTGCTTAGAAGGCAGTTGCTCTATCCAGCTGAGCTA 32078 ||||||||||| |||||| || ||||||||||| |||||||||||||||||||||| Sbjct 646307 GGATTCGAACCCACGACCCACAGCTTAGAAGGCTGTTGCTCTATCCAGCTGAGCTA 646252 >seq3436 Length=2346199 Score = 82.4 bits (90), Expect = 9e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 32013 GACTCAAGTAGGATTCGAACCTACGACCGACTGCTTAGAAGGCAGTTGCTCTATCCAGCT 32072 || || || ||||||||||||| ||||| || ||||||||| |||||||||||||||| Sbjct 1190976 GATTCCAGCAGGATTCGAACCTGCGACCCACGCCTTAGAAGGGCGTTGCTCTATCCAGCT 1190917 Query 32073 GAGCTATTGA 32082 ||||||| || Sbjct 1190916 GAGCTATGGA 1190907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621932003524480