Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_013650.1 Length=155445 Score E Sequences producing significant alignments: (Bits) Value seq1659 82.4 8e-11 >seq1659 Length=254437 Score = 82.4 bits (90), Expect = 8e-11 Identities = 108/146 (74%), Gaps = 4/146 (3%) Strand=Plus/Minus Query 113818 GGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCG 113877 || ||||| || || || |||| || ||| | || | |||| | | || || || Sbjct 98735 GGACCGGGACGCGGTTCGGCCGCCGGGTCGGTCGTGGCATACGCCCTCGGGATAACTAAT 98676 Query 113878 ATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGACCG--CCCCG 113935 |||||||||||||| ||||||||| | |||||||| ||| |||| || ||||| | || Sbjct 98675 ATCGACCCGATCAAATACGACCTGCTTTTCGAGCGTTTCCTCAATCCCGACCGTATCTCG 98616 Query 113936 ACTTCCCCGACATCGACGTCGACTTC 113961 ||| ||||| |||||| |||| ||| Sbjct 98615 -CTT-CCCGATATCGACATCGATTTC 98592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 497141887969600