Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq714 116 4e-21 seq783 105 7e-18 seq2315 96.9 3e-15 >seq714 Length=734366 Score = 116 bits (128), Expect = 4e-21 Identities = 160/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976 |||| ||||| ||||| | |||||||||||||||||| || ||||| || || | ||| | Sbjct 43902 CCTCATCCCTTGAAATCAATTCGTTGCTGAAAGTCAATCCTGGCATAAGTCCTCTTTTCT 43961 Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036 | ||||| || || | || || || || || ||||| | ||||| || || || || | Sbjct 43962 TCAGCCAGAAAATTGAAGCAAAGCTCCCGGAGAAGAAAATACCCTCCACTGCAGCAAATG 44021 Query 133037 CCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGG 133096 | |||| | |||||| | || || | | || ||||| | || ||||| || | Sbjct 44022 CTACCACTCTCTCGCCATATGTTGCAGTATCATTTGCAATCCACTGAAGGGCCCAATCTG 44081 Query 133097 CCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAA 133140 | || | ||| || |||||||| ||||| || || || || ||| Sbjct 44082 CTTTCTTTTTTACACACGGCATTGTTTCAATAGCATTAAATAAA 44125 >seq783 Length=580412 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || || || || || || |||||||||||||| | || || |||||| | Sbjct 389900 AATGCAGATTTTTGTGAAGACTCTTACTGGCAAAACCATCACTCTAGAAGTTGAGGCCTC 389959 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | ||| | |||| || || | || || || || |||||| | ||||| Sbjct 389960 AGACACAATCGAAAATGTCAAAGCCAAGATTCAGGATAAGGAAGGCATTCCCCCAGACCA 390019 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||| | | || | || ||||| ||||| || || | || ||||| ||||||||| Sbjct 390020 ACAGAGATTGATCTTTGCCGGCAAGCAGCTTGAAGATGGACGAACCCTGTCCGACTACAA 390079 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||| ||||| ||| | || || ||| | ||| |||| Sbjct 390080 CATTCAAAAAGAATCTACACTTCATCTTGTGTTGCG 390115 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || |||||||||||||| | || || ||||| | Sbjct 391125 ATGCAGATTTTCGTCAAGACTTTGACTGGCAAAACCATCACTTTGGAAGTTGAGGCTTCA 391184 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| | |||| ||||| | || || ||||| ||||| | || || Sbjct 391185 GACACAATCGAAAATGTGAAAGCCAAAATTCAGGATAAGGAGGGCATTCCTCCAGATCAG 391244 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | || || ||||| || || || | || ||||| ||||||||| Sbjct 391245 CAGCGTCTTATCTTTGCTGGTAAACAACTTGAAGATGGACGAACCCTGTCTGACTACAAC 391304 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 || || |||||| | || || || |||||||| Sbjct 391305 ATTCAGAAGGAATCCACTCTCCACTTGGTGCT 391336 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/192 (71%), Gaps = 3/192 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || || ||||||||||| | || |||||||| | Sbjct 390357 ATGCAGATTTTCGTGAAAACCCTTACTGGTAAAACCATCACTTTGGAAGTCGAGGCTTCA 390416 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | ||||| |||||| || || | ||||| || || |||||| | ||||| Sbjct 390417 GACACGATCGAAAACG-TTAAAGCCAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCA 390475 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||| | | || | || ||||| ||||| || || | | || || |||||||| Sbjct 390476 ACAGAGATTGATCTTTGCTGGCAAGCAGCTAGAGGATGGAAGGACTCTGTCAGACTACAA 390535 Query 38423 CATCCA-AAAGG 38433 || || ||||| Sbjct 390536 TATTCAGAAAGG 390547 >seq2315 Length=138946 Score = 96.9 bits (106), Expect = 3e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| ||||| || || || ||||| |||||||||||||| | || || || | | Sbjct 28022 ATGCAGATATTTGTGAAGACCCTCACAGGCAAAACCATCACACTGGAGGTAGAACCATCT 28081 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | ||| | || | |||||| | |||||||| ||||| || | || || Sbjct 28082 GATACCATTGAAAATGTAAAGGCAAAAATTCAAGACAAAGAAGGAATCCCACCAGATCAG 28141 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | |||| || ||||||||| |||| || | ||||| || |||||||| Sbjct 28142 CAGCGATTAATTTTTGCAGGCAAACAGTTGGAAGATGGTCGCACACTGTCGGACTACAAT 28201 Query 38424 ATCCAAAA 38431 |||||||| Sbjct 28202 ATCCAAAA 28209 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| || || || |||||||| ||| | || || || | | Sbjct 26778 ATGCAGATTTTTGTGAAAACTCTTACTGGTAAAACCATAACCCTTGAGGTGGAACCATCT 26837 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | |||| |||||| | ||||||||||| ||||| | || || Sbjct 26838 GATACCATTGAGAATGTAAAAGCAAAAATTCAAGACAAAGAGGGGATTCCTCCTGATCAG 26897 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| | | |||| ||| || ||||||||||| || | ||||| || ||||| ||| Sbjct 26898 CAGAGATTGATTTTCGCAGGGAAACAGCTGGAAGATGGACGCACACTTTCAGACTATAAC 26957 Query 38424 ATCCAAAA 38431 || ||||| Sbjct 26958 ATTCAAAA 26965 Score = 86.0 bits (94), Expect = 6e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| ||||| || || || ||||| || ||||||||||| | || || || | | Sbjct 27520 ATGCAGATATTTGTGAAGACCCTCACAGGAAAAACCATCACACTGGAGGTAGAACCATCT 27579 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | ||| | || | ||| || | |||||||| ||||| || | || || Sbjct 27580 GATACCATTGAAAATGTAAAGGCAAAGATTCAAGACAAAGAAGGAATCCCACCAGATCAG 27639 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | |||| || ||||||||| |||| || | ||||| || |||||||| Sbjct 27640 CAGCGATTAATTTTTGCAGGCAAACAGTTGGAAGATGGTCGCACACTGTCGGACTACAAT 27699 Query 38424 ATCCAAAAGG 38433 || ||||||| Sbjct 27700 ATTCAAAAGG 27709 Score = 86.0 bits (94), Expect = 6e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| ||||| || || || ||||| || ||||||||||| | || || || | | Sbjct 28961 ATGCAGATATTTGTGAAGACCCTCACAGGAAAAACCATCACACTGGAGGTAGAACCATCT 29020 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | ||| | || | ||| || | |||||||| ||||| || | ||||| Sbjct 29021 GATACCATTGAAAATGTAAAGGCAAAGATTCAAGACAAAGAAGGAATCCCACCAGACCAG 29080 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | |||| || || |||||| |||| || | ||||| || |||||||| Sbjct 29081 CAGCGATTAATTTTTGCAGGAAAACAGTTGGAAGATGGCCGCACACTGTCGGACTACAAT 29140 Query 38424 ATCCAAAAGG 38433 || ||||||| Sbjct 29141 ATTCAAAAGG 29150 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 38322 AAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCG 38381 |||| ||| || | || || |||||||| || | ||||| ||| | ||||||| || Sbjct 33071 AAAGCAAAGATTCAAGATAAGGAGGGAATCCCTCCAGACCAGCAGAGACTCATTTTTGCT 33130 Query 38382 GGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACG 38441 ||||||||||| || || | ||||| || || ||||| || || || || | || Sbjct 33131 GGCAAACAGCTCGAGGATGGTCGCACACTTTCAGATTACAATATTCAGAAAGAGTCTACT 33190 Query 38442 CTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||| || ||| || |||| || Sbjct 33191 CTGCATTTGGTTCTCCGTCTGCGAGGTGG 33219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500017796449280