Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_014467.1 Length=176788 Score E Sequences producing significant alignments: (Bits) Value seq7771 89.7 6e-13 >seq7771 Length=6940 Score = 89.7 bits (98), Expect = 6e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 51313 GGACAACACTTAAACGTAAACGTGTTGCGCCGCGAAACTCTGGAAGATGCTGTGAAGCAT 51372 ||||||||| | || || ||||| | ||| |||||| || |||| || || |||| Sbjct 6552 GGACAACACGTTAATGTGAACGTTCTTAACCGTGAAACTTTGCAAGACGCAATGGAGCAC 6611 Query 51373 CCAGAAAAATACCCACAGTTAACGATCCGTGTGTCCGGCTATGCAGTGCGTTTCAATTCA 51432 ||||| || |||||||||||||| ||||| ||||| || || ||||| |||| | Sbjct 6612 CCAGAGAACTACCCACAGTTAACTATCCGCGTGTCTGGTTACGCAGTTAACTTCATTAAG 6671 Query 51433 CTGACTCCTGAACAACAGCGCGACGTTAT 51461 || ||| ||||| |||| ||||| || Sbjct 6672 CTTTCTCGCGAACAGCAGCTTGACGTAAT 6700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565418322543360