Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_014636.1 Length=225268 Score E Sequences producing significant alignments: (Bits) Value seq5660 86.0 9e-12 seq558 86.0 9e-12 >seq5660 Length=10227 Score = 86.0 bits (94), Expect = 9e-12 Identities = 80/99 (81%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 189957 TTTATCTGGTGCGGATGGTCGGACTCGAACCGACACGCCTAT-GGCGCTAGAACCTAAAT 190015 ||| | |||||||| ||| ||||| ||||| || |||| |||||| || ||||| | Sbjct 10056 TTTTTGTGGTGCGGGTGGAGGGACTTGAACCCCCATGCCTCGCGGCGCTTGATCCTAAGT 9997 Query 190016 CTAGTGCGTCTGCCAATTTCGCCACATCCGC-GTTGTTT 190053 | |||||||||||||||||||||||| |||| |||||| Sbjct 9996 CAAGTGCGTCTGCCAATTTCGCCACACCCGCATTTGTTT 9958 >seq558 Length=1588989 Score = 86.0 bits (94), Expect = 9e-12 Identities = 70/84 (83%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 189965 GTGCGGATGGTCGGACTCGAACCGACACGCCTAT-GGCGCTAGAACCTAAATCTAGTGCG 190023 ||||||||| ||||||||||| ||||||| | ||| ||||| ||||| ||||| ||| Sbjct 1113066 GTGCGGATGAAGGGACTCGAACCCCCACGCCTCTCGGCACTAGATCCTAAGTCTAGCGCG 1113125 Query 190024 TCTGCCAATTTCGCCACATCCGCG 190047 || |||||| ||||||||||||| Sbjct 1113126 GCTACCAATTACGCCACATCCGCG 1113149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 720506245896960