Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq3213 93.3 5e-14 seq143 87.8 2e-12 seq2934 86.0 7e-12 seq331 86.0 7e-12 seq196 86.0 7e-12 seq11 86.0 7e-12 seq211 84.2 3e-11 seq1599 82.4 9e-11 seq427 82.4 9e-11 >seq3213 Length=2170589 Score = 93.3 bits (102), Expect = 5e-14 Identities = 211/314 (67%), Gaps = 9/314 (3%) Strand=Plus/Plus Query 11505 ATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGC 11564 |||||||||||| || || ||||| || | || | ||| || | || || || || Sbjct 507501 ATCGAAACGACCCGGACGAAGTAGTGCGTTGTCTAAAATGTCAGGTCTATTCGTTGCTGC 507560 Query 11565 AATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGAT 11624 ||| || | ||| | | | |||||||| |||||||| || | |||||| | Sbjct 507561 AATTACAATGATGTTCATGTTTTCATCGAAACCATCCATTTCAACAAGTAACTGGTTAAG 507620 Query 11625 CGTCTGTTCACGCTCATCGT-TGGAGGGCATACCACCTGCCGAACGCTTCTTACCGACAG 11683 ||||||||||| ||||||| | || || |||||| ||||| ||||||| Sbjct 507621 AGTCTGTTCACGTTCATCGTGTCCGCCGCCTA-AACCTGCGCCACGCTGACGCCCGACAG 507679 Query 11684 CGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTT 11743 | || || ||||| || |||| ||||| || |||| ||||| ||||| | | Sbjct 507680 CATCGATTTCATCTATAAATATAATACAAGGCTGGTGTTTTTTAGCCTGATCGAATAAAT 507739 Query 11744 CACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGAA-CAC 11802 | | ||||| | || || ||||| || ||||| |||||||| | ||||| ||| Sbjct 507740 CTCTAACACGGCTTGCACCCACACCGACAAACATTTCAACGAAAT------CAGAACCAC 507793 Query 11803 TGAATGAAGGGAAC 11816 ||| |||| |||| Sbjct 507794 TGATTGAAAAGAAC 507807 >seq143 Length=2364679 Score = 87.8 bits (96), Expect = 2e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 136713 CTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC 136772 ||| ||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| Sbjct 2001655 CTTTTAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTGGGTTCGATCCC 2001714 Query 136773 C 136773 | Sbjct 2001715 C 2001715 Score = 86.0 bits (94), Expect = 7e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCC 136773 ||||||||||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct 1982958 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTGGGTTCGATCCCC 1983014 Score = 86.0 bits (94), Expect = 7e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCC 136773 ||||||||||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct 1990086 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTGGGTTCGATCCCC 1990142 Score = 86.0 bits (94), Expect = 7e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCC 136773 ||||||||||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct 1990711 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTGGGTTCGATCCCC 1990767 Score = 86.0 bits (94), Expect = 7e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCC 136773 ||||||||||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct 1992160 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTGGGTTCGATCCCC 1992216 Score = 86.0 bits (94), Expect = 7e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCC 136773 ||||||||||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct 1992472 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTGGGTTCGATCCCC 1992528 Score = 86.0 bits (94), Expect = 7e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCC 136773 ||||||||||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct 1995542 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTGGGTTCGATCCCC 1995598 Score = 86.0 bits (94), Expect = 7e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCC 136773 ||||||||||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct 2001252 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTGGGTTCGATCCCC 2001308 Score = 86.0 bits (94), Expect = 7e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCC 136773 ||||||||||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct 2003804 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTGGGTTCGATCCCC 2003860 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC 136772 ||||||||||| ||||||||||||||| ||||||||||||||| |||||||| ||| Sbjct 1982492 TAGCTCAGTTGTTTAGAGCGTGGTGCTAATAACGCCAAGGTCATGGGTTCGATCCC 1982547 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC 136772 ||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| Sbjct 1992783 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTGGGTTCGATCCC 1992838 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC 136772 ||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| Sbjct 2008227 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTGGGTTCGATCCC 2008282 Score = 82.4 bits (90), Expect = 9e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCC 136771 ||||||||||||||||||||||||||| |||||||||||||| |||||||| || Sbjct 1995698 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTGGGTTCGATCC 1995752 >seq2934 Length=37431 Score = 86.0 bits (94), Expect = 7e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCC 136773 ||||||||||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct 1699 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTGGGTTCGATCCCC 1643 >seq331 Length=1161828 Score = 86.0 bits (94), Expect = 7e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCC 136773 ||||||||||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct 184512 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTGGGTTCGATCCCC 184568 >seq196 Length=1519024 Score = 86.0 bits (94), Expect = 7e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCC 136773 ||||||||||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct 499346 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTGGGTTCGATCCCC 499402 Score = 86.0 bits (94), Expect = 7e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCC 136773 ||||||||||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct 1076052 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTGGGTTCGATCCCC 1076108 Score = 86.0 bits (94), Expect = 7e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCC 136773 ||||||||||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct 1304006 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTGGGTTCGATCCCC 1304062 >seq11 Length=3755640 Score = 86.0 bits (94), Expect = 7e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCC 136773 ||||||||||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct 1880541 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTGGGTTCGATCCCC 1880485 >seq211 Length=1809889 Score = 84.2 bits (92), Expect = 3e-11 Identities = 106/143 (74%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 110329 GTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGA 110388 || ||||||| ||||| || ||||| ||| | ||||| |||||||||| ||| Sbjct 911717 GTATATTCCACTATTTCTGTGCACAAATTGCTGCATTTAATTGTCCCCAAGTTCTGCTGG 911658 Query 110389 TTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGT 110448 || ||||| |||||| ||||| ||||| ||||||||||| || ||||| || ||| Sbjct 911657 TTGGATTTTCGGTTGCAAGCATCTTTATACAGCATGTATGGTGTTCCAGTCTCTACTTGT 911598 Query 110449 GACTTGAGA-ATGGCCTTCCATA 110470 || || | | ||||| | ||||| Sbjct 911597 GA-TTCACAGATGGCATACCATA 911576 >seq1599 Length=3738065 Score = 82.4 bits (90), Expect = 9e-11 Identities = 243/370 (66%), Gaps = 10/370 (3%) Strand=Plus/Plus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 || |||||||| || || ||||| | || | ||| | | | ||| ||| || || || Sbjct 3256060 CGGTCGAAACGTCCCGGACGGAGCAATGCTTTATCCAAACTTTCGGGACGATTGGTTGCA 3256119 Query 11563 GCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622 || | | || | ||| ||| ||||||||||||||||||||| || || || || Sbjct 3256120 GCGAGTATAACTACGCCTTTCTTTCCGTCGAAACCGTCCATTTCTGTCAGGAGTTGATTC 3256179 Query 11623 ATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAA---CGCTTCTTACCG 11679 | ||| ||||| || ||||| || | || | ||| ||| | || |||||||| Sbjct 3256180 AGCGTTTGTTCCCGTTCATCATT--ACCGCCTCCCA-GTGCGTTATCGCGTTTCTTACCA 3256236 Query 11680 ACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAA 11739 | | || |||||||| ||||| | |||||| || || ||| |||||| | || Sbjct 3256237 ATGGTATCTATCTCATCTATGAAAATGATACAAGGGGCTTTCTCACTTGCCTGCTTAAAG 3256296 Query 11740 AGTTCACGTAC--ACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAG 11797 || || || || ||| ||||| | || || ||||||| || || | | | | Sbjct 3256297 AGATCGCGGACTTTGGCT--GCTCCCATGCCGACAAACATCTGTACAAATTCGGAACCTG 3256354 Query 11798 AACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTAC 11857 | || ||| || || || | |||||| || | || || |||| || ||||| | Sbjct 3256355 ATATGGAAAAGAACGGTACTTTTGCCTCACCTGCCACAGCGCGGGCGATCAGGGTCTTTC 3256414 Query 11858 CCGTACCAGG 11867 | || || || Sbjct 3256415 CTGTTCCCGG 3256424 >seq427 Length=1636619 Score = 82.4 bits (90), Expect = 9e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCG 136774 ||||||||||||||||||||||||||| |||||||||| ||| |||||| ||||||| Sbjct 412039 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAAGTCGTGGGTTCAAGCCCCG 412096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588793476337600