Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq8899 141 2e-29 >seq8899 Length=8765 Score = 141 bits (156), Expect = 2e-29 Identities = 280/406 (69%), Gaps = 10/406 (2%) Strand=Plus/Minus Query 9239 GATGCTGCGGATCTACTTGCTGCAGCAGTGGTACGGGTTGTCGGACGAAGGGCTTGAAGA 9298 |||||||||||| || | |||||| |||| | ||||||| || || | ||||| Sbjct 8512 GATGCTGCGGATGTATCTTCTGCAGTGCTGGTTCAACCTGTCGGATGAGGGAGTAGAAGA 8453 Query 9299 TGCGCTCTACGACAGCATCGCGATGCGCGCCTTCGCGGGCATCGACCTGGCGCGCGAGAA 9358 || ||||||||||| ||| |||||| || ||| ||| || | | ||| | Sbjct 8452 AGCCATCTACGACAGCTACGCAATGCGCCGGTTTATGGGGATCAACTTTTTGGAAGAGGA 8393 Query 9359 CGTGCCGGACGCCACCACGCTGTTGAAATTCCGGCGCCTGCTGGTCGAGCACGCACTGAC 9418 || ||||| || || |||||| |||||||||||| |||||| ||||| ||| Sbjct 8392 TGTACCGGATGCGACAACGCTGCTGAAATTCCGGCATTTGCTGGAACGGCACGGACT--- 8336 Query 9419 GCGAAAGCTGTTCGACGAGATCGGC-ATCGAGTTGTGCGAGCG--CGGGCTGATGATGAA 9475 | | ||||||||| ||| | | |||| || || ||| ||| | || ||||| Sbjct 8335 GGGCAAGCTGTTCTTTGAGGCCATCAATCGTGTCATGGTGGCGACCGGCCATATCATGAA 8276 Query 9476 GGAAGGCACGCTGGTGGATGCGACGATCTTCGAGGCTGCGCCG-TCCACGAAGAACGCCG 9534 || || || | |||||||| || || | || || || | | ||||| ||||||| || Sbjct 8275 GGGTGGTTCGATTGTGGATGCCACCATTATTGACGC-GCCCAGCTCCACCAAGAACG-CG 8218 Query 9535 GGAAGAGCC-GTGACCCGGAGATGCATCAGACGAAGAAGGGCAACGACTGGTATTTCGGC 9593 | || |||| | |||||||| ||||| ||||| || ||||| ||| | ||| ||||| Sbjct 8217 GAAAAAGCCAGGGACCCGGAAATGCACCAGACCAAAAAGGGAAACCAGTGGCGCTTCGGG 8158 Query 9594 ATGAAGGCCCATGTCGGCGTCGACGCCGACTCGGGTCTGGTGCATA 9639 ||||| ||||| || || || || | || |||||||||| Sbjct 8157 ATGAAATGCCATGCAGGGGTAGATGCGGGGAGCGGGCTGGTGCATA 8112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118998555912992