Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_015285.1
Length=174285
Score E
Sequences producing significant alignments: (Bits) Value
seq1604 95.1 1e-14
seq4222 89.7 6e-13
seq1752 89.7 6e-13
seq1094 86.0 7e-12
seq179 84.2 2e-11
>seq1604
Length=351056
Score = 95.1 bits (104), Expect = 1e-14
Identities = 60/65 (92%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 158986 CAGTAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCT 159045
||||||||||| |||||||||||||||||||||||||||| |||| ||||||||| ||||
Sbjct 255407 CAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCTCAGGTTCGAATCCT 255348
Query 159046 GTCTG 159050
| |||
Sbjct 255347 GACTG 255343
>seq4222
Length=21366
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/71 (89%), Gaps = 1/71 (1%)
Strand=Plus/Plus
Query 158979 ACTGGGTCA-GTAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTT 159037
|| ||||| ||||||||| ||||||||||||| ||||||||||| || |||||||||||
Sbjct 17744 ACAGGGTCCCGTAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCACAGGTT 17803
Query 159038 CGAGTCCTGTC 159048
||| |||||||
Sbjct 17804 CGAATCCTGTC 17814
>seq1752
Length=186427
Score = 89.7 bits (98), Expect = 6e-13
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 158988 GTAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCTG 159046
||||||||| |||||||||||||||||||||||||||| |||| ||||||||| |||||
Sbjct 14697 GTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCTCAGGTTCGAATCCTG 14639
>seq1094
Length=2708314
Score = 86.0 bits (94), Expect = 7e-12
Identities = 58/65 (89%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 158986 CAGTAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCT 159045
||||||||||| ||||||||||||| ||||||||| || |||||||||||||| ||||
Sbjct 606441 CAGTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTGGGTCACAGGTTCGAATCCT 606500
Query 159046 GTCTG 159050
|||||
Sbjct 606501 GTCTG 606505
>seq179
Length=2312354
Score = 84.2 bits (92), Expect = 2e-11
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand=Plus/Minus
Query 158983 GGTC-AGTAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAG 159041
|||| |||||||||| ||||||||||||| ||||||||||| || |||| |||||||||
Sbjct 786961 GGTCTAGTAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCTCAGGTTCGAA 786902
Query 159042 TCCTGTCT 159049
||||| ||
Sbjct 786901 TCCTGACT 786894
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 557411204718400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |