Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_015286.1
Length=175230
Score E
Sequences producing significant alignments: (Bits) Value
seq1690 113 5e-20
seq3213 95.1 1e-14
seq373 89.7 6e-13
seq385 87.8 2e-12
seq1991 84.2 2e-11
seq3496 82.4 9e-11
>seq1690
Length=1574822
Score = 113 bits (124), Expect = 5e-20
Identities = 70/75 (93%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 22475 TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAG 22534
|||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 1439857 TGGGGATTTAGCTCAGTTGGTAGAGCACCTGCCTTGCAAGCAGGATGTCAGGAGTTCGAC 1439798
Query 22535 TCTCCTATTCTCCAC 22549
||||||| |||||||
Sbjct 1439797 TCTCCTAATCTCCAC 1439783
>seq3213
Length=2170589
Score = 95.1 bits (104), Expect = 1e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 22475 TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAG 22534
||||| ||||||||| |||||||||| ||||||||||| ||||| || ||||||||||
Sbjct 229445 TGGGGGATTAGCTCATTTGGTAGAGCACCTGCTTTGCACGCAGGGGGTGAGGAGTTCGAT 229504
Query 22535 TCTCCTATTCTCCAC 22549
|||||||| ||||||
Sbjct 229505 TCTCCTATCCTCCAC 229519
>seq373
Length=1274844
Score = 89.7 bits (98), Expect = 6e-13
Identities = 113/149 (76%), Gaps = 10/149 (7%)
Strand=Plus/Minus
Query 22409 TAGCTCAG-TGGT-AGAGCA-ACGCTTTTGTAAAGCGTAGG-TCGTTGGTTCAAATCCGA 22464
|||||||| |||| |||||| |||||| | |||||| || |||| ||||||| ||| |
Sbjct 21203 TAGCTCAGCTGGTTAGAGCACACGCTT--GATAAGCGTGGGGTCGTAGGTTCAAGTCCTA 21146
Query 22465 CTGGGGGCTT----TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGAT 22520
| | | ||||| |||||||| ||| ||||||||||| ||||| ||||||
Sbjct 21145 CCAGACCCACCAAATGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAG 21086
Query 22521 GTCAGGAGTTCGAGTCTCCTATTCTCCAC 22549
||||||||||||| ||||| ||||||
Sbjct 21085 GTCAGGAGTTCGATCCTCCTTGGCTCCAC 21057
>seq385
Length=1145925
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/75 (87%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 22476 GGGGAATTAGCTCAGTTGG-TAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAG 22534
||||||||||||||| ||| |||||||||||| ||||| |||||| |||| | ||||||
Sbjct 504578 GGGGAATTAGCTCAGCTGGCTAGAGCGCCTGCCTTGCACGCAGGAGGTCAAGGGTTCGAC 504637
Query 22535 TCTCCTATTCTCCAC 22549
|| | ||||||||||
Sbjct 504638 TCCCTTATTCTCCAC 504652
>seq1991
Length=147557
Score = 84.2 bits (92), Expect = 2e-11
Identities = 68/81 (84%), Gaps = 1/81 (1%)
Strand=Plus/Minus
Query 22470 GGCTTTGGGGAATTAGCTCAGTTGG-TAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAG 22528
||| | ||||||||||||||||||| |||||| ||||||||||||||||| |||| |
Sbjct 145193 GGCCTCGGGGAATTAGCTCAGTTGGCTAGAGCACCTGCTTTGCAAGCAGGGGGTCATCGG 145134
Query 22529 TTCGAGTCTCCTATTCTCCAC 22549
||||| || ||||||||||
Sbjct 145133 TTCGACTCCGATATTCTCCAC 145113
>seq3496
Length=15201
Score = 82.4 bits (90), Expect = 9e-11
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 22476 GGGGAATTAGCTCAGTTGG-TAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAG 22534
||||||||||||||||||| |||||| ||||||||||||||||| |||| ||||||
Sbjct 7698 GGGGAATTAGCTCAGTTGGCTAGAGCACCTGCTTTGCAAGCAGGGGGTCATCGGTTCGAC 7639
Query 22535 TCTCCTATTCTCCAC 22549
|| ||||||||||
Sbjct 7638 TCCGATATTCTCCAC 7624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 560434267580800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |