Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq1690 113 5e-20 seq3213 95.1 1e-14 seq373 89.7 6e-13 seq385 87.8 2e-12 seq1991 84.2 2e-11 seq3496 82.4 9e-11 >seq1690 Length=1574822 Score = 113 bits (124), Expect = 5e-20 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 22475 TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAG 22534 |||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 1439857 TGGGGATTTAGCTCAGTTGGTAGAGCACCTGCCTTGCAAGCAGGATGTCAGGAGTTCGAC 1439798 Query 22535 TCTCCTATTCTCCAC 22549 ||||||| ||||||| Sbjct 1439797 TCTCCTAATCTCCAC 1439783 >seq3213 Length=2170589 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 22475 TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAG 22534 ||||| ||||||||| |||||||||| ||||||||||| ||||| || |||||||||| Sbjct 229445 TGGGGGATTAGCTCATTTGGTAGAGCACCTGCTTTGCACGCAGGGGGTGAGGAGTTCGAT 229504 Query 22535 TCTCCTATTCTCCAC 22549 |||||||| |||||| Sbjct 229505 TCTCCTATCCTCCAC 229519 >seq373 Length=1274844 Score = 89.7 bits (98), Expect = 6e-13 Identities = 113/149 (76%), Gaps = 10/149 (7%) Strand=Plus/Minus Query 22409 TAGCTCAG-TGGT-AGAGCA-ACGCTTTTGTAAAGCGTAGG-TCGTTGGTTCAAATCCGA 22464 |||||||| |||| |||||| |||||| | |||||| || |||| ||||||| ||| | Sbjct 21203 TAGCTCAGCTGGTTAGAGCACACGCTT--GATAAGCGTGGGGTCGTAGGTTCAAGTCCTA 21146 Query 22465 CTGGGGGCTT----TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGAT 22520 | | | ||||| |||||||| ||| ||||||||||| ||||| |||||| Sbjct 21145 CCAGACCCACCAAATGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAG 21086 Query 22521 GTCAGGAGTTCGAGTCTCCTATTCTCCAC 22549 ||||||||||||| ||||| |||||| Sbjct 21085 GTCAGGAGTTCGATCCTCCTTGGCTCCAC 21057 >seq385 Length=1145925 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 22476 GGGGAATTAGCTCAGTTGG-TAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAG 22534 ||||||||||||||| ||| |||||||||||| ||||| |||||| |||| | |||||| Sbjct 504578 GGGGAATTAGCTCAGCTGGCTAGAGCGCCTGCCTTGCACGCAGGAGGTCAAGGGTTCGAC 504637 Query 22535 TCTCCTATTCTCCAC 22549 || | |||||||||| Sbjct 504638 TCCCTTATTCTCCAC 504652 >seq1991 Length=147557 Score = 84.2 bits (92), Expect = 2e-11 Identities = 68/81 (84%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 22470 GGCTTTGGGGAATTAGCTCAGTTGG-TAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAG 22528 ||| | ||||||||||||||||||| |||||| ||||||||||||||||| |||| | Sbjct 145193 GGCCTCGGGGAATTAGCTCAGTTGGCTAGAGCACCTGCTTTGCAAGCAGGGGGTCATCGG 145134 Query 22529 TTCGAGTCTCCTATTCTCCAC 22549 ||||| || |||||||||| Sbjct 145133 TTCGACTCCGATATTCTCCAC 145113 >seq3496 Length=15201 Score = 82.4 bits (90), Expect = 9e-11 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 22476 GGGGAATTAGCTCAGTTGG-TAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAG 22534 ||||||||||||||||||| |||||| ||||||||||||||||| |||| |||||| Sbjct 7698 GGGGAATTAGCTCAGTTGGCTAGAGCACCTGCTTTGCAAGCAGGGGGTCATCGGTTCGAC 7639 Query 22535 TCTCCTATTCTCCAC 22549 || |||||||||| Sbjct 7638 TCCGATATTCTCCAC 7624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560434267580800