Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq3436 87.8 3e-12 seq2949 87.8 3e-12 >seq3436 Length=2346199 Score = 87.8 bits (96), Expect = 3e-12 Identities = 64/73 (88%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 216488 GTCCTACTTGCCACTTTAGCTCAGTTGGATAGAGCAACGCATTTGTAATGCGTAGGTCGT 216547 || ||| ||||| | |||||||||||| |||||||||||||| |||| |||||||||| Sbjct 1663820 GTACTATTTGCCGATATAGCTCAGTTGG-TAGAGCAACGCATTCGTAACGCGTAGGTCGC 1663878 Query 216548 CGGTTCAAGTCCG 216560 ||||||||||||| Sbjct 1663879 CGGTTCAAGTCCG 1663891 >seq2949 Length=45234 Score = 87.8 bits (96), Expect = 3e-12 Identities = 64/73 (88%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 216496 TGCCACTTTAGCTCAGTTGGATAGAGCAACGCATTTGTAATGCGTAGGTCGTCGGTTCAA 216555 ||||||||||||||||| || |||||||||||||| ||||||||| |||||| ||||| | Sbjct 6510 TGCCACTTTAGCTCAGTCGG-TAGAGCAACGCATTCGTAATGCGTGGGTCGTGGGTTCGA 6568 Query 216556 GTCCGACAAGTGG 216568 |||| | ||||| Sbjct 6569 GTCCCATGAGTGG 6581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 744850699212160